Rhizophagus irregularis: OCT59_006177
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Entry
OCT59_006177 CDS
T10295
Name
(RefSeq) uncharacterized protein
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
rie Rhizophagus irregularis
Brite
KEGG Orthology (KO) [BR:
rie00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rie03016
]
OCT59_006177
Enzymes [BR:
rie01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
OCT59_006177
Transfer RNA biogenesis [BR:
rie03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
OCT59_006177
Prokaryotic type
OCT59_006177
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
R3H_PUS7L
PUS7L_N
Motif
Other DBs
NCBI-GeneID:
36869138
NCBI-ProteinID:
XP_025175165
LinkDB
All DBs
Position
14:2254822..2257862
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AA seq
637 aa
AA seq
DB search
MTSHEEQPAKKIRLNSGEPVVVLLNDTKNRSEDSEKIASNIEVNQMIRERDVGIIEYANP
SIPGFWGVIKQRFSDFMVNEIDNSRNIVHLTNFNIPKVENPVDKPDVQDIGIPKEKISDE
QVFQEMKALLGEEISNQIQSLLSGQDENLSFVNTKVEKDKNKRKAIHQFFKDHFGDKLNT
EANDGVIKVSMHTDKTRKDRRSRQQKNDIWDALGGSYCQFTLYKENKDTIEAINFLSKLI
KVHAKTFSYAGTKDRRAITVQKVTANRIKAERLLGLNSNLKGMKLGNFEYVKTPLKLGDL
RGNHFITTIRNVQVENEEVISKAIESLQSRGFVNYYGMQRFGSSSIPTFHIGRALLQNNW
EEAVNLIMKPRPGDRQDHQIARQHWIENHDAKKALELFPKQCIAETQILNYFAKTGQLND
YAGAFATIPRNLRLMYVHAYQSYIWNSIVSERICIHGCHAPAVGDLVIKDEDSIADIDSE
DLVDDNFTVNSDDKKEIKVKVLAEEDLNNYSIFDVVLPLPGYSVIYPNNNIFEKYKELMW
KDHLDPREMRRNVKDFSLSGSYRKIMGKPNDLSWKIFKYDDQNISLSLTDLDLLDGKSEP
ESLPNGKNTALRINFSLSASSYATVLLRELMKPTEKE
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atgacttctcatgaagaacaaccagcaaaaaaaattcgtttaaattccggagaacctgtt
gttgttctactgaacgatactaaaaataggtcagaagattctgagaaaatcgcttcaaat
attgaagtaaatcaaatgatccgtgaacgagatgttggaattattgaatatgctaaccca
tcgattccgggattttggggtgttataaaacaaaggttctcggattttatggttaatgag
attgataattctagaaatatcgttcatcttacaaattttaatattccaaaagtagaaaac
cctgtggataaacctgacgttcaagatatagggataccgaaagaaaaaatatcagatgaa
caagtttttcaagaaatgaaagctttgcttggtgaggagatttcaaaccaaattcaaagt
ttattaagtggtcaggatgaaaatctctcatttgttaatacgaaggttgaaaaagacaaa
aacaaaagaaaagccattcatcaattttttaaggatcattttggcgataagttaaataca
gaagcaaatgatggcgtaataaaagtcagtatgcatactgataagactagaaaggacaga
aggagtagacaacaaaaaaatgatatctgggatgcattgggtggatcttattgtcagttt
actttatacaaggaaaataaggatacaattgaagctattaattttctgagcaagcttata
aaagttcatgcaaaaacattttcatatgctggtacgaaagatcgtcgtgctataactgtt
cagaaagtaaccgcaaacaggataaaagctgaaagattactcggattaaattctaacctg
aaaggaatgaagttaggaaactttgaatatgttaagactccattaaagcttggtgacttg
agagggaatcattttataaccacaataagaaatgttcaagttgaaaatgaggaagtaatt
tcgaaagctatagaatctttgcaatcacgtggatttgttaattattatggcatgcaaaga
tttggtagttcatctatccctacatttcatattggtcgtgcacttttacaaaataactgg
gaagaagctgtcaatttgattatgaagcctcgacccggagatcgtcaggatcatcaaata
gcaagacaacattggatagagaatcatgatgcgaaaaaggcattagaattatttcccaaa
cagtgtattgcagaaactcaaatattaaattattttgcaaagactggacaacttaatgat
tatgcaggagcttttgcaacgataccaagaaatctacgtcttatgtatgtacatgcttat
caatcatatatatggaatagtattgtttcagagaggatatgcatacatggttgtcatgct
ccagctgtaggagatttggttattaaggacgaggattcgattgcagacatagatagtgaa
gatctagtggatgataattttactgttaattcggatgacaaaaaggaaattaaagtgaaa
gtacttgccgaagaagatttgaataattattcaatttttgacgtggtgttacctttgcct
ggatattctgttatttatcctaataataacatatttgagaaatataaagaattaatgtgg
aaagatcatttggatccacgcgaaatgagaagaaatgtcaaggacttttctttatctgga
tcatacagaaaaattatgggaaagccaaatgatttatcatggaaaatttttaaatatgat
gatcagaatatatcactgtccttgactgacttagatttattggatggaaaatcagaacca
gaatcattaccaaatggtaaaaatactgcattaagaataaatttttccttatcagctagt
tcatatgctacagtattattaagagaattaatgaaacctacagaaaaggaataa
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