KEGG   Rhizophagus irregularis: OCT59_008237
Entry
OCT59_008237      CDS       T10295                                 
Name
(RefSeq) uncharacterized protein
  KO
K03012  DNA-directed RNA polymerase II subunit RPB4
Organism
rie  Rhizophagus irregularis
Pathway
rie03020  RNA polymerase
rie03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:rie00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    OCT59_008237
  09124 Replication and repair
   03420 Nucleotide excision repair
    OCT59_008237
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:rie03021]
    OCT59_008237
   03400 DNA repair and recombination proteins [BR:rie03400]
    OCT59_008237
Transcription machinery [BR:rie03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     OCT59_008237
DNA repair and recombination proteins [BR:rie03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      OCT59_008237
SSDB
Motif
Pfam: RNA_pol_Rpb4 DUF445 DALR_1 Cep192_D5
Other DBs
NCBI-GeneID: 36871489
NCBI-ProteinID: XP_025169540
LinkDB
Position
16:2128973..2130136
AA seq 138 aa
MSHHAPIIHRSRKAPQEEEDAAKLKFGEDFEDEEFLFISEVALLLEKIPDSQKNNTVYKK
TEELVNTFTRFHNDESVRELRKTLMRHKLHKYELAQLANLVCEEIDEAKSLIPSLAKRSD
EEIRAMLDDISALKKYQS
NT seq 417 nt   +upstreamnt  +downstreamnt
atgtctcaccatgctccaattattcatcgttcgcgtaaagctcctcaagaagaagaggat
gccgcaaaattaaaatttggcgaagattttgaggatgaagagtttctatttatttctgaa
gtagcacttttgttagaaaaaataccagattctcaaaagaataataccgtgtacaaaaaa
accgaggaattagtaaatacgtttacaagatttcataatgatgaatcagttcgtgaactt
cgaaaaactttaatgagacacaagctacataagtatgaattagcacagttggcaaatcta
gtttgtgaagaaatagatgaggcaaaatcactaataccaagtttagccaaaagaagtgat
gaggaaattcgtgccatgcttgatgacatttcagcattgaaaaaatatcaaagttaa

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