KEGG   Rhizophagus irregularis: OCT59_008264
Entry
OCT59_008264      CDS       T10295                                 
Name
(RefSeq) uncharacterized protein
  KO
K10842  CDK-activating kinase assembly factor MAT1
Organism
rie  Rhizophagus irregularis
Pathway
rie03022  Basal transcription factors
rie03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:rie00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    OCT59_008264
  09124 Replication and repair
   03420 Nucleotide excision repair
    OCT59_008264
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:rie03021]
    OCT59_008264
   03400 DNA repair and recombination proteins [BR:rie03400]
    OCT59_008264
Transcription machinery [BR:rie03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     OCT59_008264
DNA repair and recombination proteins [BR:rie03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     OCT59_008264
SSDB
Motif
Pfam: MAT1 zf-C3HC4_5 zf-RING_5 zf-C3HC4 zf-RING_2 zf-C3HC4_3 zf-C3HC4_2 zf-RING_UBOX zf-RING_4 zf-rbx1 Prok-RING_4 TRAF3_RING zf-UDP RecR_ZnF zf-C3HC4_4 zf-ANAPC11
Other DBs
NCBI-GeneID: 36870562
NCBI-ProteinID: XP_065999225
LinkDB
Position
16:2249454..2250963
AA seq 305 aa
MASSKNAKYSFDADEVCPICKNNRYLTPNMKLLVSDCYHKMCESCIDRLFANGAGPCPIC
QKILRKVSFIEPTFEDLRVEKEVKVRRMLSKQYNQRQEDFESLRLYNDYLEMVEEIAWNL
INDKDKKETEALMNKHLNENRDIIARNRRKQEEEAKKANYFSEKVKIDKRMKFESYKKEL
DEEKKRKEREEAELIEELAKSKGSAAAILAEKKAMRESSRSQEDKSPQQHYPSPGDSNLS
SWYSSNLESTSFMEDSQEFDAIASEYLDIGYYTLKDKYYDPYTETNTKLRAECNLRYSIN
KIIFK
NT seq 918 nt   +upstreamnt  +downstreamnt
atggcttcttcaaaaaatgcgaaatattcatttgacgcagatgaagtttgtccaatatgt
aagaataataggtacctaacacctaacatgaaactgcttgttagtgattgttatcataaa
atgtgcgaatcatgcatagatagattatttgcaaatggggcaggaccatgtccaatttgt
caaaaaatcttaagaaaagtcagctttattgaacctacatttgaagatttacgtgtcgaa
aaagaagtaaaggttaggagaatgttatcaaaacagtataatcaacgtcaagaagatttc
gaaagtttacgtttgtataatgattatttggaaatggttgaagaaatagcatggaatctt
attaatgataaggacaaaaaagaaacagaagctttgatgaataagcatcttaatgaaaat
agagacattatagctcgtaataggcgtaaacaagaagaagaagctaaaaaggcaaattat
tttagtgaaaaagtaaagatagataaacgtatgaaatttgaaagttataaaaaagagttg
gatgaggaaaagaaacgaaaagaaagagaggaagctgaattaatcgaagagctggctaaa
tctaaaggatctgcagctgcaattttagcagaaaagaaggctatgcgagaaagttcacgt
agtcaagaagataaaagtccacaacaacattatccttcaccaggagacagcaatcttagt
tcatggtatagcagtaatttagaatctactagttttatggaagattcacaagaatttgat
gcaattgcgtctgaatatttggacattggttattatacgcttaaagacaaatattatgat
ccatataccgagaccaataccaagttacgtgcggagtgtaatttgaggtattcaataaat
aaaataatatttaaatag

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