Rhizophagus irregularis: OCT59_008809
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Entry
OCT59_008809 CDS
T10295
Name
(RefSeq) Protein mago nashi 2
KO
K12877
protein mago nashi
Organism
rie Rhizophagus irregularis
Pathway
rie03013
Nucleocytoplasmic transport
rie03015
mRNA surveillance pathway
rie03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rie00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
OCT59_008809
09122 Translation
03013 Nucleocytoplasmic transport
OCT59_008809
03015 mRNA surveillance pathway
OCT59_008809
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rie03019
]
OCT59_008809
03041 Spliceosome [BR:
rie03041
]
OCT59_008809
Messenger RNA biogenesis [BR:
rie03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
OCT59_008809
Spliceosome [BR:
rie03041
]
Complex C
Other components
EJC/TREX
OCT59_008809
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Mago_nashi
Motif
Other DBs
NCBI-GeneID:
36866525
NCBI-ProteinID:
XP_025181067
LinkDB
All DBs
Position
17:complement(397199..398448)
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AA seq
148 aa
AA seq
DB search
MGGDEEFYVRYYTGHMGRYGHEFLEFEFRADGRCRYANNSNYRNDSLIRKEMYVSPLMMK
ELKRIIQESEIMKEDDQKWPKKNVVGRQELEIRLGNEHISFETAKIGSLVDVQESDDPEG
LRVFYYLVQDLKCLVFSLIGLHFKIKPI
NT seq
447 nt
NT seq
+upstream
nt +downstream
nt
atgggcggagacgaagaattttatgttcgttattacactggtcacatgggacgatatggc
cacgaatttcttgagttcgagtttcgcgctgatggacgatgtcgttatgctaataactca
aattacagaaatgatagtttgataagaaaagagatgtatgtaagtccattaatgatgaaa
gaattgaaacgaattatccaagaaagcgagatcatgaaagaagacgatcaaaaatggcca
aaaaagaatgttgttgggcgacaagaacttgagattagattaggcaatgaacatatttca
tttgagactgcaaaaattggatctcttgttgacgtacaagaaagtgatgatcccgaagga
ttacgcgtattttattatttagtacaagatctcaaatgcttggtattttcgctcattggg
ttacatttcaaaatcaaacctatctag
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