Rhizophagus irregularis: OCT59_009088
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Entry
OCT59_009088 CDS
T10295
Name
(RefSeq) Homospermidine synthase 1
KO
K03283
heat shock 70kDa protein 1/6/8
Organism
rie Rhizophagus irregularis
Pathway
rie03040
Spliceosome
rie04141
Protein processing in endoplasmic reticulum
rie04144
Endocytosis
Brite
Protein phosphatases and associated proteins [BR:
rie01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-5
PP5-interacting proteins
OCT59_009088
Spliceosome [BR:
rie03041
]
Complex B
Other components
Prp19 complex
OCT59_009088
Complex C
Prp19-CDC5 complex
OCT59_009088
Ribosome biogenesis [BR:
rie03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
OCT59_009088
Chaperones and folding catalysts [BR:
rie03110
]
Heat shock proteins
HSP70 / DNAK
OCT59_009088
Membrane trafficking [BR:
rie04131
]
Endocytosis
Clathrin-mediated endocytosis
Other core components
OCT59_009088
Autophagy
Chaperone mediated autophagy (CMA)
Chaperones
OCT59_009088
Proteasome [BR:
rie03051
]
Eukaryotic proteasome
Assembling factors
Other assembling factors
OCT59_009088
Mitochondrial biogenesis [BR:
rie03029
]
Mitochondrial protein import machinery
Endoplasmic reticulum membrane and cytosol
Other ER-memrane and cytosol factors
OCT59_009088
Exosome [BR:
rie04147
]
Exosomal proteins
Proteins found in most exosomes
OCT59_009088
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
36882385
NCBI-ProteinID:
XP_065999751
LinkDB
All DBs
Position
17:complement(1612798..1614912)
Genome browser
AA seq
569 aa
AA seq
DB search
MSGKAIGIDLGTSYSCVGVWRNDRVEIIANDQGNRTTPSYVAFTDTEILIGDAAKNQAFI
NPHNTVFSVHRLIGHNFNDKNVKSGMKYWPFKVINKPVINVEYKGKRKDFTPEEILSMVL
VKMKETAEASLGTQVNNAVITVPAYFNNSQRQAIKDAGLIAGLNVLRIITGPTAAAIAYG
LDNKTTGERNVLVFDLGGGTLDVSLLTIEEGIFKVKAVAGDNHLGGEDFDNRLISHFVQE
FKRKFKKDICSNARAVRRLRTACERAKRTLSTSIKASIEIDSLYEGIDFYTSLTRTRFEE
LNQDLFNSTMEPVEKVLRDSKIDKSQVHEIVLVGCSTYIPKIQKMVSEFFDGKKPNKSIN
PAEAATYGAAVQAAILSGDTSEKTQDLLLLDIVPLSLSIETADGVMKPLIKRERTRTRDS
NLLGKFELSGISPAPRGVPQIKVTFDIDANGILNVSAVGKTTGRSNKITVTNDKGLSKEE
IERMVAERMQYAQKMEPQNCLESYAYNLLTVVRNIDNIKNELHDAAQKSIAWLENNREAR
KDEHDQEQKLLEEIVDQIMSNLNNVNISS
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgagtggaaaagcaatcggcattgatttaggaacgtcatattcctgtgttggtgtttgg
cgaaatgatagagttgaaattattgcaaatgaccagggtaatcgtacaacaccatcatat
gtagctttcactgatacagagattcttattggagatgcggccaaaaatcaagcttttata
aatcctcataatactgtatttagtgttcatcgtcttattggtcataatttcaatgataag
aacgtcaaatctggtatgaagtattggccattcaaagttattaataaaccagttatcaat
gtagaatataaaggaaaaagaaaagatttcacacccgaagaaattttatccatggtattg
gtaaaaatgaaagagaccgcagaagcatctcttggcacacaagttaataatgctgtaatt
acggtaccagcttattttaataactcccaacgacaagctataaaagatgccggtttgatt
gcgggtttaaatgtacttcgtatcattactggaccaactgcagcggctattgcttacgga
ttggataataaaactactggagaacgaaatgttcttgtctttgatttgggtggtggtacc
cttgatgtctctctcttaactattgaagaggggatttttaaagtaaaagccgttgctggt
gacaatcatcttggtggtgaagattttgataatcgtcttataagtcattttgtacaagaa
ttcaaaagaaaatttaaaaaagatatttgttccaatgcacgtgctgtccgtcgtttaaga
acagcatgtgaacgtgcgaaacgtacactttcaacatcaataaaagcttccattgaaatt
gattctctttatgaaggtattgacttctatacctctttgacgcgaaccagatttgaagaa
ttaaatcaagatctatttaattctacaatggaacctgttgagaaagtacttcgagatagt
aaaattgacaaaagtcaagtccatgaaattgtcttagtcggttgttcaacgtatattcct
aagattcaaaaaatggtatctgaattctttgatggtaaaaaaccaaacaaatctatcaat
cctgctgaagccgcaacctatggtgctgccgtacaagctgctattttatctggtgatact
tctgaaaagactcaagatctacttttacttgatatcgttcctttatctctgagcatcgaa
actgctgatggtgtaatgaagccactaattaaacgtgaacgtactcgaacaagagatagc
aacttactcggaaaattcgaattatctggaatttctcctgctccaagaggtgttccgcaa
ataaaagttacctttgatattgatgcaaatggcatcttgaacgtttctgcagttggtaaa
acaaccggaagatcaaataagattaccgtcactaatgacaaaggattatcgaaagaagaa
atcgaacgcatggttgcagaaagaatgcaatatgcgcaaaaaatggaaccacaaaattgc
ttagagtcctatgcatacaacttgcttactgttgttcgaaatattgataatataaagaat
gaacttcatgatgcagcacaaaaatcaattgcatggcttgagaataaccgagaagcaaga
aaagatgaacatgaccaggaacaaaaattacttgaagagattgtcgaccaaataatgagt
aatctaaataacgtaaatatttcttcatag
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