Rhizophagus irregularis: OCT59_009099
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Entry
OCT59_009099 CDS
T10295
Name
(RefSeq) Homospermidine synthase 1
KO
K03283
heat shock 70kDa protein 1/6/8
Organism
rie Rhizophagus irregularis
Pathway
rie03040
Spliceosome
rie04141
Protein processing in endoplasmic reticulum
rie04144
Endocytosis
Brite
Protein phosphatases and associated proteins [BR:
rie01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-5
PP5-interacting proteins
OCT59_009099
Spliceosome [BR:
rie03041
]
Complex B
Other components
Prp19 complex
OCT59_009099
Complex C
Prp19-CDC5 complex
OCT59_009099
Ribosome biogenesis [BR:
rie03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
OCT59_009099
Chaperones and folding catalysts [BR:
rie03110
]
Heat shock proteins
HSP70 / DNAK
OCT59_009099
Membrane trafficking [BR:
rie04131
]
Endocytosis
Clathrin-mediated endocytosis
Other core components
OCT59_009099
Autophagy
Chaperone mediated autophagy (CMA)
Chaperones
OCT59_009099
Proteasome [BR:
rie03051
]
Eukaryotic proteasome
Assembling factors
Other assembling factors
OCT59_009099
Mitochondrial biogenesis [BR:
rie03029
]
Mitochondrial protein import machinery
Endoplasmic reticulum membrane and cytosol
Other ER-memrane and cytosol factors
OCT59_009099
Exosome [BR:
rie04147
]
Exosomal proteins
Proteins found in most exosomes
OCT59_009099
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
36873811
NCBI-ProteinID:
XP_025177424
LinkDB
All DBs
Position
17:complement(1659135..1661469)
Genome browser
AA seq
618 aa
AA seq
DB search
MYRRAIGIDLGTSYCCVGVWQNDRVEIITNDQGNRTTPSYVAFTDTEILIGEAAKNQAVM
NPHNTVFSVHRLIGRNFNDQDVQSDMKYWPFKVINKNDKPFINVEYKGEKRDFTPVEILS
MLLVKMKETAEDYLGITVKNTVITVPAYFNKSQRQAIKDAGLIAGLNVLRIITGPTAAAI
AYGLDNKAPGERNVLIFDLGGGTCNVSLLIIKDGIFEVYSVAGDTHLGGEDFDNRLVNHY
IQEFKSKFKKDISSNIRAIHRLRTACEHAKCILSTSTQTSIVIDSLYEGIDFYTSLTRTR
FEELNKDLFRSVMKHVEKVVFQDDRIYRIDKSQVHEIILVGCSTYVPKIQRMISIFFNNK
KLNKFVNPAEAAAYGAAVQAAILSGDTSEKTQDLLLLDVAPLPLGIETAGGVMTPVIKRN
TTVPIKKSEIISTDFDNQSSVSIKIYEGESTQTRDNNFLGKFELSGIYSAPKGVPQIEVT
FDIDLNDNLNVSAVDETTGRSNKIIVTNDKERLSKEEIERMVCEAEKYHVERKQYAQKIE
AQNCLESYAYKLLDVVKDIDDIKYKLHDAAQKSITWLENNPEARKDEYENEQKLLEENTD
LIINKLYSLNIFSNSNVL
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atgtatcgtagagcaatcggtattgatttaggaacgtcatactgctgtgttggtgtttgg
caaaatgatagagttgaaattattacaaatgaccagggtaatcgtacaacaccatcatat
gtagctttcactgatacagagattcttattggagaagcggctaaaaatcaagctgttatg
aatccacataatactgtatttagtgttcatcgtctcattggtcgtaatttcaatgatcag
gacgtccaatctgatatgaagtattggccgttcaaagtcatcaacaaaaatgacaaacca
tttattaacgtcgaatacaaaggcgaaaagagagatttcacacccgtagaaattttatcc
atgttattggttaaaatgaaagaaaccgcagaagattatcttggtataacagttaaaaat
actgtaattacagttccagcttactttaacaaatctcaacgtcaagctataaaagatgct
ggtttgattgcgggtttaaatgtacttcgtatcattactggaccaactgcagcggctatt
gcttacggattggataacaaagctcctggggaacgaaatgttcttatctttgatttgggt
ggtggcacttgtaacgtctctctattaattattaaagatggaatttttgaagtatattct
gttgctggtgatactcatcttggtggtgaagattttgacaatcgtcttgtaaatcattat
atacaagaattcaaaagcaaatttaagaaagatatttcttctaacattcgcgctattcat
cgtttaagaacggcatgtgaacatgcaaaatgtatactttcaacatcaacacaaacttcc
attgtaattgattctctttacgaaggtattgacttctatacctctttgacacgtaccaga
tttgaagaattgaataaagatctgtttcgttctgtcatgaaacatgttgagaaggtagta
tttcaggacgatagaatttatagaattgacaaaagtcaagtccatgaaattatcttggtt
ggttgttcaacgtatgttcccaagattcaaaggatgatatctatattctttaataacaaa
aaactaaacaagtttgttaatcctgctgaagctgcagcctacggtgctgccgtacaagct
gctattttatctggtgatacttctgaaaagactcaagatctacttttacttgatgtcgct
cctttacctctgggtatcgaaactgctggtggtgttatgacaccagttattaaacgtaat
actacagtacccattaagaaatctgaaattatatctacagattttgataatcagtctagt
gtatcaattaaaatatatgaaggtgaaagtactcaaacaagagataacaactttctcgga
aaattcgaattatctggaatttattcagcgccaaaaggtgttccacaaattgaagttacc
tttgatattgacttaaatgacaacttgaacgtttctgctgttgatgaaacaaccggaaga
tcaaataagattattgtcactaatgacaaagaacgattatcgaaggaagaaatcgaacgc
atggtttgtgaagctgaaaaatatcatgtagaaagaaaacaatatgcacaaaaaatagaa
gcacaaaattgcttggaatcttatgcatacaaattacttgacgtagttaaagatattgat
gatataaagtataaacttcacgatgcagcacaaaaatcaattacatggcttgagaataac
ccagaagcaaggaaggatgaatatgaaaatgaacaaaaattacttgaagagaatactgac
ctaataataaataaactttatagcttaaatattttctctaattcaaatgttttataa
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