Rhizophagus irregularis: OCT59_009160
Help
Entry
OCT59_009160 CDS
T10295
Name
(RefSeq) uncharacterized protein
KO
K01874
methionyl-tRNA synthetase [EC:
6.1.1.10
]
Organism
rie Rhizophagus irregularis
Pathway
rie00450
Selenocompound metabolism
rie00970
Aminoacyl-tRNA biosynthesis
rie01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rie00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
OCT59_009160
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
OCT59_009160
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
rie01007
]
OCT59_009160
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rie03016
]
OCT59_009160
Enzymes [BR:
rie01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.10 methionine---tRNA ligase
OCT59_009160
Amino acid related enzymes [BR:
rie01007
]
Aminoacyl-tRNA synthetase
Class I (U)
OCT59_009160
Transfer RNA biogenesis [BR:
rie03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
OCT59_009160
Prokaryotic type
Other AARSs
OCT59_009160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1g
tRNA-synt_1
tRNA-synt_1e
Anticodon_3
tRNA-synt_1d
Motif
Other DBs
NCBI-GeneID:
36865547
NCBI-ProteinID:
XP_025183308
LinkDB
All DBs
Position
17:1983649..1986561
Genome browser
AA seq
579 aa
AA seq
DB search
MSQFLSSKRFPNFINHQNINSLLISTSYIRKVTNLQHIIYKQYATSAFKKPIYITTPIFY
VNAIPHIGHLYSAVIADSLKRYYELKGHKVIFSTGTDEHGLKIKQSAEKSKMNPQEFCDQ
VSSKFKELFDIANISYTTFIRTTEQRHKDAVKYFWKCLMNNGFIYKGRYKGWYSVSDEAF
YNTSHVQEIQNPDSKEKLMIATESGQSVEWTIEENYKFRLSEFQDKLKSWLEENPQVIMP
INKFNEVKAWIDSGLSDLSISRPHSRLDWGVDVPEDSEQTVYVWLDALINYLTVTGFPWP
HDDLNGWPVDIHVIGKDILKFHAVYWPAFLMAANLPLPQKILAHSHWTMEKQKMSKSRGN
VVDPIKVMNDYGVDTIRYYLMRDGGIADDGDYSDENIKVRYRKDLAGQLGNLVSRSISPA
LNPSSIVPSAPKFLGEIAEKDANLYYKLQSLPDLVDKHFQNMEFGKGLSFIFDAIAEANK
YFTDNEPWKLKNDKNQKEAVNNILFYSVETVRISGILLQPVMPTKMSELLDRLGIQKDQR
TWEYARFGRGWDLNNNHNRKIKFHHDEKSVLFPKFKLTK
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaatttctttctagtaaaagatttccaaattttataaatcatcaaaatattaat
tctttgttaattagtacaagttatatacgaaaagttacaaatttacaacacattatttat
aaacaatatgccacatcagcttttaagaaaccaatttacattactacaccaattttttat
gttaatgcaatcccacacataggacatttatattcagcagtaattgctgatagtctaaaa
cgatattatgaattgaaaggtcataaagttatttttagcacaggaactgatgagcatgga
ttgaaaattaagcaatctgcagagaaaagtaaaatgaatccacaagaattttgtgaccaa
gtttctagtaaatttaaggaactttttgatatcgccaacatcagttatacaaccttcata
cgcacaacagaacaaagacataaagatgctgtaaaatatttttggaagtgtcttatgaat
aatggattcatctataaaggcagatataaaggttggtattcagtatctgatgaggccttt
tataatacttctcatgttcaagaaattcaaaatcctgattcaaaagaaaaactcatgata
gcaactgaatctggtcagtctgtagaatggacaatagaagaaaattataaatttcgcctt
tcagaatttcaagataaattaaaaagttggttagaagagaatcctcaagtcattatgccg
attaataaattcaatgaagtcaaagcatggattgatagtggattatctgatttatcaata
tctagaccacattctagactagattggggagttgatgttccggaggattcagaacaaaca
gtttatgtttggctggatgctttgatcaattatcttacagtaacaggatttccttggcca
catgatgatttgaatggatggcccgtagatatccatgtaataggaaaagatattttgaaa
tttcatgcagtatattggcctgcatttttaatggcggcaaacttgccacttcctcaaaaa
attttagctcattcacactggacgatggaaaagcaaaaaatgtcaaaaagtcgtggtaat
gtagtagatccaattaaagtaatgaatgattatggagttgatacaattcgttactattta
atgagagatggtggaattgcagatgatggagattattctgatgagaacataaaagtacga
tatcgaaaagacttggcagggcaacttggaaatcttgtatcacgtagtatttctcctgca
ttaaatccttcttctattgttccatcagcacctaaatttctcggtgaaatagccgaaaag
gatgctaacttgtattataaattacaaagccttccagatctcgtagataaacatttccaa
aatatggaatttgggaaaggattgtcatttatatttgacgctattgctgaggctaacaag
tatttcacagataatgaaccatggaaattaaaaaatgacaagaatcaaaaagaagctgtt
aataatatattgttttactcggtagaaacagtaagaatttcgggaattttgttacaacca
gttatgccaacaaaaatgtctgaattattagatagacttggaatacaaaaagatcaaagg
acttgggaatatgctagatttggtagaggatgggatttgaataataatcataatagaaag
attaaatttcatcatgatgaaaaaagtgttttatttccaaaatttaaattaacaaaataa
DBGET
integrated database retrieval system
