KEGG   Rhizophagus irregularis: OCT59_009177
Entry
OCT59_009177      CDS       T10295                                 
Name
(RefSeq) uncharacterized protein
  KO
K03130  transcription initiation factor TFIID subunit 5
Organism
rie  Rhizophagus irregularis
Pathway
rie03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:rie00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    OCT59_009177
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:rie03021]
    OCT59_009177
   03036 Chromosome and associated proteins [BR:rie03036]
    OCT59_009177
Transcription machinery [BR:rie03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     OCT59_009177
   Coactivators
    SAGA/TFTC/STAGA complex
     OCT59_009177
Chromosome and associated proteins [BR:rie03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     OCT59_009177
    STAGA complex
     OCT59_009177
    TFTC complex
     OCT59_009177
    SAGA complex
     OCT59_009177
    SLIK complex
     OCT59_009177
SSDB
Motif
Pfam: WD40_Prp19 WD40 TFIID_NTD2 WD40_WDHD1_1st EIF3I WD40_CDC20-Fz Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd WDR55 Beta-prop_WDR90_POC16_2nd Beta-prop_EML WD40_MABP1-WDR62_1st Beta-prop_SCAP Beta-prop_TEP1_C NBCH_WD40 Beta-prop_IFT122_1st ANAPC4_WD40 Beta-prop_DCAF4 Beta-prop_SPT8 Beta-prop_WDR75_1st WDR90_beta-prop_4th Beta-prop_EIPR1 Beta-prop_IFT140_1st Beta-prop_RIG_2nd Beta-prop_HPS5 WD40_RFWD3 Beta-prop_NWD2_C Beta-prop_Vps41 Beta-prop_WDR19_1st LisH PEP5_VPS11_N Beta-prop_DCAF12 WD40_like Beta-prop_VPS8 WDR54 PROPPIN Mala_s_1-like
Other DBs
NCBI-GeneID: 36875306
NCBI-ProteinID: XP_025183290
LinkDB
Position
17:complement(2063846..2067082)
AA seq 710 aa
MAANQPNSNSLNNKNPEPLILTYLAHKGYKQTEAMFRQESTRNFPIDQNNDTMTPNFLSY
SNYPNYTTYSNYTNINPPDIYKQSYTALRKWIEGSLDKFKDELQRILWPIFVHSYLELVS
RGFSDHATEFFEEFQLDHKMHSRELGTMRVIKYSHHVQENEFAKNFRSKKYPIQMSSISY
DIFFDFLQDNPPNGSSNSFLFRLVNQSLNIEVGTSHTDVGIPSFSAQELEEYNKHELHLG
HMPMHPEFREEIEKTLREQDEIYQRQFEEENQLGINEDQTNGIPASLYQEFVNKVKREQS
SDAPDRMSIPLPSHKEADVLAQVETIKDLRLRVELGPSSTLPSVCFYTFFNTYDSLNCLT
ISEDTSLIAGGFSDSYIKIYSLKHEKLRGLRGRINPAEINTASDLENAREKVGSDCKRLL
GHSGPVFGLSFSPDNKYLISCSEDRTARLWSSDTYTNLVCYKGHNSPIWDVDFSPLGFYF
VTASHDRTARLWSCDHIYPLRIFAGHISDVDTVKFHPNSKYIVTGSSDKSVRMWDIQGGR
CLRLFSGHTGGISCISISDDGRLMASAGEDKSIMLWDLGSGKLLKKMLGHKSTVYSLDFS
KESSILVSGGSDCTVRLWDVKKGTSDSPNEDEHYLSKIRMDIDENRSHSSLAKQKQITET
KDLIATLPTKQTPVYKIHFTRRNLCLAAGAYVPTEEELTESMGYNEQKST
NT seq 2133 nt   +upstreamnt  +downstreamnt
atggcagcaaatcaaccaaatagtaattcacttaacaataaaaatccggaacctcttata
ttaacttaccttgctcataaaggatataaacaaaccgaggcaatgtttagacaagaatct
acaagaaactttccaattgatcaaaataacgatactatgacgcctaattttttgagttac
tctaattaccctaattataccacttattctaattacactaatataaacccaccagatata
tacaaacaaagttatactgctttaaggaaatggatagaaggatcattagataagtttaag
gacgaattgcaaagaattctatggccgatatttgtacattcgtatctcgaacttgtgtca
agaggattttctgatcatgcgacggaattttttgaagaatttcaactagatcacaaaatg
cacagcagagagctcggtacaatgcgagtgattaaatattcacatcacgtacaggagaat
gaatttgctaaaaattttcgttcaaagaaatatccaatacagatgtcttcaatatcatat
gatatttttttcgattttttacaagacaatcctcctaatggaagtagtaatagtttctta
ttcagacttgtaaatcaatcccttaatattgaagttggtacatcgcatacagatgttggt
atccctagtttttccgctcaagagcttgaagaatacaataaacacgaacttcatttggga
catatgccgatgcatccagagttccgtgaggaaattgagaaaacgttaagagaacaagac
gaaatttatcaaagacaatttgaggaagaaaatcagttagggataaatgaagaccagaca
aacggaataccggcttcactttatcaagagtttgtaaataaagtaaaaagggaacagagt
tcagatgctcctgacaggatgtctatcccgctgccttcacacaaagaagctgatgtatta
gcacaagtcgaaacgattaaagacttgagactacgagtagaactgggaccatcttcaact
cttccatcagtttgtttttatacattttttaatacttacgatagcctgaattgcttaacc
atttctgaagacacgtctcttatcgctggaggtttttcagattcatacattaaaatttat
agtttgaaacacgaaaaactaagaggacttcgaggacgtataaatccagctgaaatcaat
actgccagcgatcttgaaaatgcgagagaaaaagtcggtagtgattgtaaaagactttta
ggacattccggacctgtgtttggtttgagtttcagtcctgataataaatatttaatttca
tgctcagaagacaggacagcgcgactttggagttcagacacttatactaaccttgtatgt
tataagggccacaattctccaatatgggatgttgattttagtcctttaggtttttacttc
gtaacggcttcacatgatagaactgcaaggctttggagctgtgatcatatttatccttta
aggatctttgcgggacatatctcagatgtagacactgttaaatttcatcccaattctaaa
tacattgttactggctcaagtgataaatcagttcgaatgtgggatattcaaggaggtaga
tgtcttcgattattctctggacatactggaggaatttcttgtataagtatatctgatgat
ggacgtttaatggcctcagcaggagaagataaatccataatgctgtgggatcttggaagt
ggaaagcttctcaagaaaatgttgggacataaatctactgtatattcattagattttagc
aaagaaagtagtattttagtatcaggcggttcagattgtaccgttcgtttatgggatgta
aaaaagggtacttcagatagtcccaatgaagatgaacattatttgagcaaaattagaatg
gatatagatgaaaatcgctcacattcctcgctagctaaacaaaaacaaataaccgaaacg
aaggaccttatagcaacattaccaacaaaacaaacccctgtttataaaattcattttact
agaagaaatttatgtcttgcagctggtgcttacgtgcctaccgaagaagagttaacagaa
tcaatgggctataacgaacaaaaaagtacttaa

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