Rhizophagus irregularis: OCT59_010306
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Entry
OCT59_010306 CDS
T10295
Name
(RefSeq) uncharacterized protein
KO
K02927
ubiquitin-large subunit ribosomal protein L40e
Organism
rie Rhizophagus irregularis
Pathway
rie03010
Ribosome
rie04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
rie00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
OCT59_010306
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
OCT59_010306
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
rie03011
]
OCT59_010306
04121 Ubiquitin system [BR:
rie04121
]
OCT59_010306
Ribosome [BR:
rie03011
]
Ribosomal proteins
Eukaryotes
Large subunit
OCT59_010306
Archaea
OCT59_010306
Ubiquitin system [BR:
rie04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
OCT59_010306
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ubiquitin
Ubiquitin_2
Rad60-SLD
Dsc3_N
TBK1_ULD
TECR_N
Rad60-SLD_2
V-set_2
MCR_alpha_N
DDE_Tnp_1
Motif
Other DBs
NCBI-GeneID:
36865488
NCBI-ProteinID:
XP_025183381
LinkDB
All DBs
Position
18:3208313..3208897
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AA seq
83 aa
AA seq
DB search
MQIFIYADRTYTIEVEYHDTVAILKEKFYKKTGINCERQRLRLIHRCKQLEDTRSLSEYN
INKESTVYLVHTLLSCKKCPGQK
NT seq
252 nt
NT seq
+upstream
nt +downstream
nt
atgcagatttttatttatgctgatcgaacgtatactatcgaagttgaatatcatgatact
gttgcaattctcaaagaaaaattttataagaaaacaggtattaattgtgaaagacaaaga
ttaagattaattcatcgttgcaaacaacttgaagatacaagatcattatcagaatataat
attaataaagaatcaaccgtttatttggttcatacgcttcttagttgtaagaaatgtccc
ggtcagaaatga
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