Rhizophagus irregularis: OCT59_010756
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Entry
OCT59_010756 CDS
T10295
Name
(RefSeq) uncharacterized protein
KO
K13199
plasminogen activator inhibitor 1 RNA-binding protein
Organism
rie Rhizophagus irregularis
Brite
KEGG Orthology (KO) [BR:
rie00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rie03041
]
OCT59_010756
Spliceosome [BR:
rie03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
OCT59_010756
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HABP4_PAI-RBP1
Stm1_N
Motif
Other DBs
NCBI-GeneID:
36866808
NCBI-ProteinID:
XP_025180449
LinkDB
All DBs
Position
19:complement(1093472..1095662)
Genome browser
AA seq
420 aa
AA seq
DB search
MASVASRNPFDLLGESTDPEAVAKEVEQSKEQPVVIPKKVDRSRASPKEARIRHEYPQRG
GHKPSASNRNNEDTRSGAPRDRNVGPRLSRREEGGGGGGGGDYHPTRTPRGARPSDRSRG
GGRGGGGGGRRREYDRHSGTGRHDSEKKENQGWGKPTETPWDNNTATENPSWNAEPSDAN
ASSSWGDNANDANAGNWGDNKTTEENNDWSAGVAVPEESNTTTNDSWNNSAEKTENSSWE
QQPETNDAWNGDEAAKNEDTAANESTPAPEPEENQKTLDEYRAEKAQKLLDITLPEARKP
NEGVDDSQWKDAVPLEKDEEDDFLFTGKEQSYRLKNKKNKSKNFVEITQTFERHGGGAPR
GRGRGRGGRGGGRGGGGDGRDRRENNYDDRDNRRRGGGGGGRSGVVNLDDQSAFPSLGAS
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atggcgagtgttgcaagtcgaaatcctttcgacctcctaggtgagagtacagatcctgag
gccgttgctaaagaagtggaacaatcaaaggaacaacctgttgttattccgaaaaaagtt
gacaggtctcgtgcatctcccaaagaggccagaattcgtcacgagtatcctcaaagaggt
ggacacaagccttctgcttcaaacagaaataatgaagatacgagatctggagctcctcgt
gatcgaaatgtaggtcctcgtctttcccgtcgtgaagaaggtggtggaggcggtggaggc
ggtgattatcatcctacaagaaccccacgcggtgctcgtccaagtgatcgtagtcgtgga
ggtggtcgtggcggcggcggcggcggccgacgtcgtgaatatgataggcatagcggaaca
ggaagacatgatagtgaaaagaaagaaaatcaagggtggggtaaacccaccgaaacacct
tgggataataatactgcaactgaaaatcctagttggaatgcagaacccagtgatgctaat
gcctcttcctcttggggtgataatgctaatgatgccaatgctggtaattggggtgataac
aaaaccaccgaagaaaataatgattggagtgcaggtgttgctgttcctgaagaaagtaat
actactactaatgatagttggaacaactccgctgaaaaaactgaaaatagtagttgggag
caacaacctgaaaccaatgatgcttggaatggagatgaagctgcgaaaaatgaagatact
gctgccaatgaatcgactccagctcctgaacctgaagaaaatcaaaagactcttgacgaa
taccgtgccgagaaagcccaaaagttattagatattactcttccggaagctagaaaacct
aatgaaggagttgatgattctcagtggaaagacgccgtccctcttgaaaaggacgaagaa
gatgattttctttttactgggaaagaacaatcttatcgcctcaagaacaagaagaataag
tctaaaaattttgtagaaattacgcaaacattcgagagacatggaggaggtgccccacgc
ggacgtggtcgtggacgtggtggccgtggtggcggtagaggaggtggaggtgatggacgc
gatcgtcgcgaaaataattatgatgatcgtgataatcgtcgtcgtggaggtggcggcggc
ggacgtagcggcgtcgtcaaccttgatgatcaaagtgcttttccaagtctcggtgcttcc
taa
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