Rhizophagus irregularis: OCT59_010891
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Entry
OCT59_010891 CDS
T10295
Name
(RefSeq) uncharacterized protein
KO
K03124
transcription initiation factor TFIIB
Organism
rie Rhizophagus irregularis
Pathway
rie03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
rie00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
OCT59_010891
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rie03021
]
OCT59_010891
Transcription machinery [BR:
rie03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
OCT59_010891
Prokaryotic type
Archaeal type
TFB
OCT59_010891
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_C
Cyclin_N
Trm112p
RB_B
CrtC
Motif
Other DBs
NCBI-GeneID:
36862018
NCBI-ProteinID:
XP_025168940
LinkDB
All DBs
Position
19:complement(1587559..1589768)
Genome browser
AA seq
329 aa
AA seq
DB search
MANIPFPRLQPTTEQGPKAILPDLNIRLVCPDCKNPVPNIIEEFANGDLVCGDCGLVLGD
RIIDTRSEWRTFANDEGDDPSRVGAAANPLLDGAQLDTVISRRDGGSGMARDLNKVHGRA
NAVKGEKNLIQAYKEIAAMSDAIGLTKLIADIAKQLYKRVEEEKLLRGKSTESIIAACIF
IACRQENVPRTFKEICAITRVPKKEIGRCFKTLIRTFETNVSTMASEDLMSRFCSMLHLR
MEVQKAALDLTMKTKEHGTLAGKSPVSVAAACIYMASCLYQQPQSTRDVAQVTGVSEVTI
KNSYKLLWTEREKLLDEKKYGGFENLPSP
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atggcaaatattcctttcccacggcttcaacctacaacggagcaggggcctaaagcaatt
ctaccagaccttaatattcgtttagtatgcccagattgtaaaaatcctgtaccaaatatt
attgaagaatttgctaatggtgatttagtatgtggagattgcggtttagttctcggtgat
cgtataattgataccaggtctgaatggagaacctttgctaatgacgaaggtgatgatcct
tctcgtgttggtgctgctgcaaatccacttcttgatggtgcgcaattagatactgtcatt
tcaagaagagatggtgggtcaggaatggccagagaccttaataaagttcatggaagagca
aatgcagtaaagggagagaaaaatcttattcaagcatataaagaaatcgccgcaatgagt
gatgctattggcctaacaaaattaattgctgatatagcaaaacaattatacaagagagtt
gaagaagaaaaacttttacgtggtaaaagtactgaatcaattattgccgcttgtatcttt
attgcttgtagacaagaaaatgtaccacgtacatttaaggagatatgtgctattacacga
gtccctaaaaaggaaatcggaagatgttttaaaactttgattcgtacttttgaaacaaat
gtatcgacaatggcttcagaagatttgatgtcacgtttctgttccatgttacatcttcga
atggaagttcaaaaggcagctcttgatcttactatgaaaacaaaagaacacggtacttta
gctggtaaatctcctgtatctgttgcggcggcttgtatctatatggcttcttgtttgtat
cagcagcctcagtcaacaagagacgttgctcaagttactggtgtttctgaagtaacaatt
aaaaattcttacaagttactttggactgaaagagaaaagttacttgatgaaaagaaatat
ggcggatttgaaaacttaccatctccctaa
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