Rhizophagus irregularis: OCT59_010892
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Entry
OCT59_010892 CDS
T10295
Name
(RefSeq) Vacuolar protein sorting-associated protein 26
KO
K18466
vacuolar protein sorting-associated protein 26A/B
Organism
rie Rhizophagus irregularis
Pathway
rie04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
rie00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
OCT59_010892
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rie04131
]
OCT59_010892
Membrane trafficking [BR:
rie04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
OCT59_010892
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps26
Arrestin_N
TilS_C
IL17R_D_N
Motif
Other DBs
NCBI-GeneID:
36871727
NCBI-ProteinID:
XP_025168939
LinkDB
All DBs
Position
19:complement(1589873..1591530)
Genome browser
AA seq
305 aa
AA seq
DB search
MSLFSFSAPVDIDIRFNGEENRKLVEVKVDRDRRERFPLYFDGETVAGRVTIRPRDGKRL
EHQGIKIEFVGNIELFYDRGNHYEFASLVQELAVPGEMRQPQFFDFEFKNVEKQYESYHG
INVKLRYFVRVTISRRLTDIVNEKDIWVYSYRMPVEGNSSIKMEVGIEDCLHIEFEYNKS
KYHLKDVIVGKIYFLLVRIKIKHMELSIIRRETTGAAPNQYNESETITKFEIMDGAPVRG
ETIPIRLFLGGFELTPTFRDVNKKFSTRYYLNLVLVDEENRRYFKQQEITIYRRKIDDGI
DDGQE
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgagtctctttagcttcagcgcgccagttgatattgatattcgttttaatggagaagaa
aatagaaaattggtggaagttaaggttgatagagatcgccgcgaaagatttcctctatac
tttgatggcgaaaccgtagcgggccgagtaactattagacctcgtgatggaaagaggctg
gaacatcaaggaattaaaatagaatttgtggggaatatcgaacttttctatgatcgaggt
aatcattacgaattcgcttccttagtgcaggaattagcagtacctggtgaaatgcgtcaa
ccacaattttttgactttgaattcaaaaatgtcgaaaaacaatatgagagttatcatgga
ataaatgtcaaattgagatatttcgttcgtgtaactatttcaaggcgtttaactgatatt
gtgaatgaaaaggatatatgggtttattcataccgtatgccggtagaaggaaatagctct
atcaaaatggaagttggtattgaagactgcttacatattgaattcgaatacaataagtca
aaataccatcttaaagatgtaattgtaggaaaaatttattttctacttgttcgcataaaa
attaaacatatggaattgtcaattattcgtcgcgaaacgactggtgcagctccaaatcaa
tataatgaaagtgagacaattactaaatttgaaattatggatggtgctccggtacgcggt
gaaacaattcccattcgcctcttccttggaggtttcgaattaaccccaactttccgtgat
gtaaacaaaaagttttccacacgttattatcttaatcttgtacttgttgacgaagaaaat
cgacgatattttaaacaacaagagattacgatttacagaagaaaaattgatgatggtata
gacgatggccaagaatag
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