Rhizophagus irregularis: OCT59_010945
Help
Entry
OCT59_010945 CDS
T10295
Name
(RefSeq) uncharacterized protein
Organism
rie Rhizophagus irregularis
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIB
Motif
Other DBs
NCBI-GeneID:
36872414
NCBI-ProteinID:
XP_025167125
LinkDB
All DBs
Position
19:1789515..1795320
Genome browser
AA seq
1590 aa
AA seq
DB search
MNQERVNNNSFAFVMEDPSKPRKYQLNFQLNDNHQFKESPLIQPTMDQSLASHHLHNPQH
HSLHHIDHNPLPRQTSSITLPSIKELMQIPPSPVPPPPSLPPSLPPTQRILQQQQQHHHH
HHHHHHQQQQQQQQQQQQQQQQQQQQQQQQFLQHHHNIHSQHKTESLISSSRPHLPPLLD
TPQHPSNFNYPFNATSRNDNRNERIDSHLQISQHSQHSQHSQQQHSSHLLSQHTHQRPLM
SSSSTPEVSSYYSSHSYPSHSTNTQYSVNHKINPTPPPSSQHHVHYQQPQLPQSQRSPPH
QVQVLPQQMQPSQRMLHQQHQSHHHHLQHSLPMSHHQTTQSQQQIQQGYHPPPPPPTHSL
PPSSSHHHSNVYNNEVMAVVPERNQLDHQSSATSVASRAPYNSHYYSSQVYPNNPPIIST
PSHVTSSHGRNAPLTEYQAVRDVRDVRDVRDARDVRDVSLSNEHHQHHQQQNGISGHVQQ
YPQVQHPQVQHPQVQHPQVQHPQVQHPQVQHPQVQHPQVQHPQVQHHQVQHPQIQQQQQQ
MYIQNHHHQQQQQQQQQQQQQQQQQQQQQQLQPLQVSHLQVPPQNISRPLTPPQLNLPPQ
QPQIQNQFLLENRETSPFHLAAPSHHHSGSNSSVSTRSSSPAPSTPVASNNLPFSPNGGS
HVNNTVNNNSIDKSLEQNVSVKKKGRSKPPRPIVPAGPIPNQQPISNNQPLPTNTPNDPL
VFVQYSNSSNNNTPTKPPSSRSRKNSISGVSAPLVSKRGRKAKDSSSTAAATMQTKVDDD
VYNVIPFTPTTVSENNEKNVAQSRKRDYSSSNESQNNKRYRKDEDVHVIQDDDDTMEDVI
HNVKEEEPKMDVDDEGVKLLLSLKGDNATTLVNNVSENTVTVDKPVVEERVQDIKIKEEP
SINKVVTPINEPVVKNEIDIKPEPVDQVVTKKVREMSITDEEKQSYVQKKAALKSPKNTI
KSEFPEKINSISVTRGFINKDQDKKERVKVASVECDSDSDLAMDDGSDDDIDQNKQPERN
FNSIEGNMQWNSDDMETEEEVEEEVEISSLNRDSTIRTGTNGAAKDHINNNSTSNVINHR
KSNEDVKETNVTINSNTSDKKLSLPASPISACFTNTNNGILSRKASTSSSISRKGSTSSN
GSNKEKDNVICGSPIEAIASPISSPPSVKTVSIDAVNSTTGNTNSNNSNGKPQRPCPPRR
RSTMRDDEKLELNAIEWEKNIEIPHDIWVETLRVFEIVKHSKEMKNRQPHRKRNHILASI
LFILCRQNGLPRTFVEICNAASIRKQEIGTYYRLMLKVFESNGLGDGSNGTVDSAEYLKR
WCQNLKLPQHILNAAIHVYRQASELNITTGKCPVSVGAASIWLSIHAWNETRTSTYSHTV
HTDDAELIKVEHKDVATAAGVVNATLVGCFKNLLRFKEQLLPEGFLKEARERSPYYLKSN
SINCVNNNNSESDAYGRLSSSTDNVKSYISKADNSDNGKSKVETATTETTSKPIKSEPVS
KLPTKSQVKVERSETNTQSLKSPIKETETIDKVPAISKKEVKNEKTLPVLKSPPRMTKPI
PEIEPGQEDADDELEEGELREDDDDNMVVD
NT seq
4773 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaggaacgagtaaataataatagtttcgcgtttgtaatggaagatccttcaaaa
ccaagaaaatatcaacttaattttcaactaaatgataatcatcaatttaaagaatcaccg
cttatacaaccaacaatggatcaaagtttagcttcgcatcatcttcataatcctcaacat
cattcacttcatcatattgatcacaatcctctaccaagacaaacttcgtcgatcacactt
ccttctataaaagaattaatgcaaattccaccatctcctgtacctcctcctccatcacta
cctccatctttacctcctactcaaagaatattacaacaacaacaacaacatcatcaccat
catcatcaccatcatcatcaacaacagcagcaacaacagcagcaacaacaacagcagcag
cagcagcagcagcaacaacaacaacaacaatttttacagcatcatcataatattcattct
caacataaaacagaatctttaatttcttcatcgaggcctcatctacctcctttacttgat
acacctcaacatccttctaattttaattatccttttaatgctacttcacgtaatgataat
agaaacgaaaggattgattcacatttacaaatatcacaacattcacaacattcacaacat
tcacaacaacagcattcatctcatttattatcacaacatactcatcaacgtcccttaatg
tcgtcgtcttcaacaccagaagtttcttcatattattcatctcattcttacccatctcat
tctacaaatacacaatattctgtaaatcataaaattaatcctacccctcctccttcatct
caacatcatgtacattatcaacaacctcagttaccacaatcgcagcgatcccctcctcat
caagtacaagttttaccacaacagatgcagccctcacaacgaatgttacatcaacaacat
caatctcatcatcatcacttacaacattcgttaccaatgtctcaccatcaaacaactcaa
tcgcagcaacaaatacagcaagggtatcatcctcctcctcctcctcctactcactctctt
cctccttcctcttctcatcatcattctaatgtatataataacgaagttatggcagtagta
cctgaaagaaatcagctcgatcatcaatcttccgctacttctgttgcttctcgtgctcct
tataattctcattattattcctctcaggtgtatccaaataaccctccaataatttccact
ccatcacatgtgacttcctctcatggtcgtaatgcaccattaactgagtatcaagctgtt
cgtgatgttcgtgatgttcgtgatgttcgtgatgctcgtgatgttcgtgatgtttcgtta
agtaatgaacatcatcaacaccatcaacaacaaaatggtatttctggtcatgtacagcaa
tatcctcaagttcaacaccctcaagttcaacaccctcaagttcaacaccctcaagttcaa
caccctcaggttcaacaccctcaggttcaacaccctcaggttcaacatcctcaggttcaa
catcctcaggttcaacatcatcaggttcaacatcctcaaattcaacaacaacaacaacaa
atgtacattcaaaatcatcatcatcagcagcagcagcagcaacaacaacaacagcaacaa
cagcagcaacaacagcagcaacaacaacaactacaaccactacaagtttctcatttgcaa
gttcctccacaaaatatttctcgtcctcttacgccaccgcagttaaacttgcctccacag
caaccacaaattcaaaatcaatttttattggagaatcgtgaaacttcaccatttcatttg
gcggcaccttcgcatcatcattcaggaagtaattcgtcggtttccactcgatcatcatct
cctgcacctagcactcctgtagcttctaataatcttccattttctcctaatggtggtagt
catgttaataatacggttaataataatagtattgataaatctcttgaacagaatgtttct
gttaaaaagaagggacgttctaaaccaccgagacctattgtacctgctggacctatacca
aatcaacaacctatatctaataatcaacctttaccaacaaatactccaaatgatcctctt
gtgtttgtacaatattcaaattcttcaaataataatactccgacaaaaccgccatcatct
agatcaagaaaaaatagtatatctggtgtctcagctcctctcgtttcaaaacgcggtaga
aaagctaaagattcatcatcaacagcagcagccaccatgcaaacaaaggttgatgatgat
gtttataatgttattccattcactccaactactgtatcggagaataatgagaagaatgtt
gcacaaagtcgtaagagagattattcttcttcaaatgagagtcaaaataacaaaaggtat
agaaaagatgaagatgtacatgttattcaagatgatgatgatacaatggaagatgttatt
cataatgtgaaggaagaggaaccaaagatggacgttgatgatgaaggagtcaaattactc
ttatcattgaagggtgataatgcaactactttggtgaataatgtttcagaaaatacggtt
accgttgacaaacctgtggtagaagaacgtgttcaggatatcaaaattaaagaggagcct
tcaatcaacaaagttgttacaccaattaatgaaccagttgttaaaaatgaaattgatata
aagccggaaccggttgaccaagtggtaacaaaaaaagtcagagaaatgtcaattacggat
gaagaaaaacaatcttatgtacaaaagaaagctgctcttaaatcaccaaaaaatacaata
aaatctgagtttcctgagaagattaatagcatttcagttactcgtggttttattaacaaa
gatcaagataaaaaagaacgagttaaagtagcatcagttgaatgtgattcagatagcgat
ttagctatggatgatggttctgatgatgatattgatcaaaataaacaacccgaacgtaat
tttaatagtatagaaggaaatatgcaatggaatagtgatgatatggaaactgaagaagaa
gttgaagaagaagtagaaatctcctctcttaatcgtgattctactataagaactggtaca
aatggtgcagctaaagatcatatcaataataatagtacttcaaatgttattaatcatcga
aagagtaatgaggatgttaaagaaactaatgtaaccataaattcaaatacttctgataaa
aaattatccctacctgcctcacctatctctgcatgctttacaaacaccaataatggtatt
ttgtctcgtaaagcttcgacttcgagttctatttcgcgtaagggttcaacctcatcaaat
ggaagtaataaagaaaaggacaatgtgatttgcggttcacctattgaggctatcgcttca
cctatttcgtcaccaccttcagttaaaactgtttccattgatgctgtaaattccactact
ggtaatacaaatagcaataatagtaatggtaaaccacaaagaccttgcccacctagacgt
aggtcaacaatgagggacgatgaaaagctcgaattgaacgcaattgaatgggaaaagaac
atcgaaattcctcatgatatttgggtggaaactttaagagtgtttgaaattgttaaacat
tccaaggaaatgaaaaatcgtcaacctcatcgcaaacgtaatcatattcttgcttcaatt
ctttttatattatgtcgccaaaatggtctaccacgtacttttgttgaaatatgtaatgct
gcttcaattaggaaacaagagattggaacttattatcgtctcatgcttaaagtatttgag
agcaatggcttgggtgatggatctaatggaactgtagattctgctgaatatttgaaacga
tggtgccaaaatcttaaacttccacaacatatactcaatgcagctattcatgtttataga
caagccagtgaattaaatattactaccggaaaatgtccagtatctgttggagctgcttca
atatggttatctatacatgcatggaatgaaactagaacttcaacctatagccacactgta
catacggatgatgcagagttgataaaagtagaacataaagatgttgcaacagctgctggt
gtcgttaatgctactcttgttgggtgtttcaaaaatttattaagattcaaagaacaatta
ttacctgaaggatttttgaaggaagccagagaaagatcaccttattatttaaagtcaaat
tcaataaactgtgttaataataataattcggaaagtgatgcatatggtcgattgtcttcg
tcaacggataacgttaaatcttatatttctaaagctgataatagcgataatggcaaatca
aaagttgaaacggctacaactgaaacaacttcaaagcctataaaaagtgagccagtatca
aaattgccaacgaagtcacaagtcaaggttgagaggagcgaaacgaatactcaatcattg
aaatcaccaattaaagaaaccgaaactatagataaagttccagcaatttctaaaaaagaa
gtaaaaaatgaaaaaactttaccggtattaaaatctccacctagaatgacaaaaccaata
cctgaaattgaacctggtcaagaagacgctgacgatgaactagaagaaggagagttaaga
gaagatgatgatgataatatggtggttgattaa
DBGET
integrated database retrieval system