KEGG   Rhizophagus irregularis: OCT59_010957
Entry
OCT59_010957      CDS       T10295                                 
Name
(RefSeq) uncharacterized protein
  KO
K12825  splicing factor 3A subunit 1
Organism
rie  Rhizophagus irregularis
Pathway
rie03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:rie00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    OCT59_010957
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:rie03041]
    OCT59_010957
Spliceosome [BR:rie03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    OCT59_010957
 Complex B
    OCT59_010957
 Complex C
   U2 SnRNP specific factors
    OCT59_010957
SSDB
Motif
Pfam: PRP21_like_P Surp ubiquitin zf_UBZ Glyco_transf_90 Rad60-SLD zf_C2H2_ZNF598
Other DBs
NCBI-GeneID: 36874738
NCBI-ProteinID: XP_066000854
LinkDB
Position
19:1861346..1864748
AA seq 721 aa
MVAVLQPETSLNLESVAISETGNGIIDESSKPLVGIIYPPPDIRNIVDKTAVFVARNGVQ
FEERIRENEKHNAKFSFLNPNDPYHAYYQYKIAETKEGKAPKKVEAKEVVQEVKDVAPLP
RAPPKEPPAFEFMTDMPAISAQDLDILKLTAQFVARNGRQFMTALSQREQRNYQFDFLRP
NHSLFNYFTKLVEQYTKRVEYAAYQEEERKKAEEKEDQERIAYASIDWHDFVIVETVEFT
EADETIDLPPPMSIMELENMTLAQKKMASVNLVESQPDEKVGEIDMEMDDDVDMEEDEEG
ENGDQEQESTPVVVEIKPPDTSAPMKIVKDYTPKAYAPKSTVDRPTVICPRCKQVIPVDE
MDDHVRIELLDPKWREQKLAAELKKKESNLLQEGTDVAKNLKAFSGYRSDIFGTEETEIG
RKIGEEEEKKKRIEKEKVVWDGHTASINMATQRAAAGVSIDEQIAAIHRSKGLTSDSDSK
IGPKIPQAQDQRYQHPHQQGMQHSSSIQQPPIYSGYPTHSAPGIPPGPPPAPYPGYVPSS
APFAHQLPGYISPLTTQAMSTPAPPLPPTPLAMGQSSLAPPAPPTPPPPPSKIGRAVDDE
AELPAMLKRQKMDALAGGSLVSVEEWIESHQGPINVQVQCPTIPEKPEWNCHGQTIVLDN
LPLTTFVSTVKDRIASQLNFPAGRQKLTIGGAVMKNQLSLAHYNMEDGDIIGLAIKDRGK
K
NT seq 2166 nt   +upstreamnt  +downstreamnt
atggttgctgtgttacagcccgaaacttcgctgaacttagaatcagttgcaatatcggag
acaggaaatggaattattgatgaatcatctaaaccattggttggaattatatatccacca
ccggacataagaaatatcgttgataaaaccgcagtctttgtcgcaagaaacggtgttcaa
tttgaagaacgtattcgagagaatgaaaaacataatgcaaagtttagttttttgaaccct
aatgatccatatcatgcgtactatcaatacaaaattgccgagacaaaagaagggaaagcc
cctaaaaaagttgaagcaaaagaggttgtacaagaagtcaaagatgttgctccactgcca
agagctccaccaaaagagccacctgcttttgaatttatgactgacatgcctgctatttca
gcacaagatctagacattttgaaattaacagctcaattcgtagcacgtaacggtagacaa
tttatgacagctctttcgcaacgcgaacagcgaaattatcaatttgattttttacggcca
aatcatagtttatttaattactttacaaaactagtggaacagtacacaaaacgagttgaa
tatgccgcttatcaggaggaagaaagaaaaaaggccgaggaaaaggaagatcaagagaga
attgcgtatgcttcaatagattggcatgactttgttatagtggaaaccgtagaatttaca
gaagctgatgagactattgatcttccgccaccaatgagtattatggaattggaaaatatg
actcttgctcagaagaagatggcttcggttaatttagtagaatctcagccagatgagaaa
gttggcgaaattgatatggagatggatgatgatgtagatatggaagaagacgaggaagga
gaaaatggagaccaagagcaagaatcaactccggtagtagtggaaatcaaacctccggac
acttcggcaccaatgaaaattgttaaagattatactccaaaagcgtatgctcctaaatca
actgttgacagaccaacagtaatttgtcctagatgtaaacaggttatacccgttgatgaa
atggatgatcacgttcgcattgaactattagatccaaaatggagagaacaaaagttggcg
gcagaattaaaaaagaaagaatcaaatttattgcaagaaggtaccgacgttgcaaagaat
ctcaaggcattttctggttaccgatctgacatttttggcactgaagaaaccgaaattggg
cgaaaaattggtgaggaggaagaaaagaaaaaacggatcgaaaaggaaaaagtcgtatgg
gatggtcacacggcatcaatcaatatggctactcagcgtgcagctgccggtgtttccatc
gatgaacaaatcgctgcaattcatagaagcaaaggcttgacaagtgatagtgattctaaa
attggaccaaaaattcctcaagcgcaagatcagcgttaccaacatccacatcaacaagga
atgcaacattcatcttcgattcaacaaccacctatttattctgggtatccgactcattca
gctccgggaataccaccaggtcctccacctgctccataccctggttatgtaccttcttct
gcaccatttgcccatcaacttcctggttatatttcacctttaacaacacaagctatgtca
acaccagctcctcctttacctccaacaccattggcgatgggacaatcttcactagcaccg
ccagcgcctccaacaccacctccacctccatctaaaatcggtcgagctgtagacgatgaa
gcggaattaccagcaatgttgaaacgacagaaaatggatgctttggcaggaggaagtctt
gtatctgtagaggaatggatagaatcgcatcagggcccaattaatgtgcaagttcaatgt
ccaacaattcctgaaaaacccgagtggaattgccacggtcaaactatcgttttagacaat
ttaccgcttactacattcgtatccaccgtaaaggataggatcgcctcacaactaaacttc
cctgcaggcagacagaaacttacaattggaggcgcagtaatgaaaaatcagctttcatta
gctcattataatatggaagacggagatattattggattggctattaaagatcgaggaaag
aaataa

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