Rhizophagus irregularis: OCT59_010990
Help
Entry
OCT59_010990 CDS
T10295
Name
(RefSeq) uncharacterized protein
KO
K08516
synaptobrevin homolog YKT6
Organism
rie Rhizophagus irregularis
Pathway
rie04130
SNARE interactions in vesicular transport
rie04138
Autophagy - yeast
Brite
KEGG Orthology (KO) [BR:
rie00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
OCT59_010990
09140 Cellular Processes
09141 Transport and catabolism
04138 Autophagy - yeast
OCT59_010990
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rie04131
]
OCT59_010990
Membrane trafficking [BR:
rie04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
Ykt6
OCT59_010990
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Longin
Synaptobrevin
Motif
Other DBs
NCBI-GeneID:
36864329
NCBI-ProteinID:
XP_025186142
LinkDB
All DBs
Position
19:complement(2013925..2015017)
Genome browser
AA seq
198 aa
AA seq
DB search
MKIYSVSIYSRDSNEETIRLAAEYDLSSFGFFQRSTVQDIIMVISKTIAERTSPGQRQRV
EEQPYVGYVYARSDIHLTGVIVTDEEYPQRVSFSVLNKILDEFLIKFPPNDWSKPDKISF
PELKTYLIKYQDPKQADQITKVQEQLDETKLVMNKTIESLLQRGEKLDDLIDRSQEISFQ
SKAFYKQARKTNSCCTIS
NT seq
597 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatctactctgtgtcgatttactctcgagattctaacgaagaaaccattcgtttg
gctgcagaatatgatctctccagttttggtttctttcagcgtagtactgtacaagatatt
attatggtaatttccaaaactatcgcagaaagaacaagtcctggtcaaagacaacgtgtc
gaagaacagccttatgtaggatatgtttacgcacgttctgacattcatcttacaggagtc
attgtcacggatgaagagtatccacaacgtgtatcattctctgtgctaaacaaaattctt
gatgaatttctcataaaatttccgccaaatgattggtccaaaccagacaaaatctctttt
ccagaattgaaaacttatttaattaagtatcaagatcctaagcaagcagatcagattaca
aaagtacaagaacaattggatgaaactaaactagtcatgaataaaacgatcgaatccctt
ttgcaacgtggagaaaaattggacgatttgatagataggtcacaagaaatttcttttcag
tccaaagcattttataagcaagccagaaagacaaatagctgctgtactatttcgtga
DBGET
integrated database retrieval system