Rhizophagus irregularis: OCT59_010993
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Entry
OCT59_010993 CDS
T10295
Name
(RefSeq) Integrator complex subunit 11
KO
K13148
integrator complex subunit 11 [EC:3.1.27.-]
Organism
rie Rhizophagus irregularis
Brite
KEGG Orthology (KO) [BR:
rie00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rie03041
]
OCT59_010993
Spliceosome [BR:
rie03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Integrator complex
OCT59_010993
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-Casp
Lactamase_B_6
RMMBL
Lactamase_B
Lactamase_B_2
IntS11_C
Anti-Pycsar_Apyc1
Peptidase_M54
GP24_25
Motif
Other DBs
NCBI-GeneID:
36859346
NCBI-ProteinID:
XP_025186139
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Position
19:<2019420..2021462
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AA seq
623 aa
AA seq
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MIKIIPLGAGQDVGRSCILISIGDDSTGIKNLMFDCGMHMGYNDERRFPDFSYISKTNRF
TEQLDCIIVSHFHLDHCGALPYFTEMCGYEGPIFMTHPTKAICPILLEDYRKITVERKGE
TNFFTSQMIKDCMKKVTAVNLHQTIKVNGDDDLEIKAFYAGHVLGAAMFYVRVGTQSVVY
TGDYNMTPDRHLGAAWIDKVRPDLLITESTYATTIRDSKRTRERDFLKKVHDCVTQGGKV
LIPVFALGRAQELCILIETYWERNNLNVPVYFSAGMTEKANDYYKLFINWTNEKIKNTFV
QRNMFDFKHIKPWDRQYLDLPGPAVLFATPGMLHIGTSLEVFKKWAPYPENMVIMPGYCV
AGTVGAKVLNGDKEIYIDAYNKINVKLQVKNLSFSAHADAKGILQLIKQCDPKNVMLVHG
EKAKMEFLQEKIKRECRIPCYSPANGETTIIDTPLSIPVDVSVDLLKRHLTAQKLPLPTS
DDKIDITKIKPVNGIPIQGILTMEPDQIPKLMDVNEAIRDTNLPLRELTFEFIKSFDPNK
IDTSTRTDIRTQALENVYEKVRKALKDDVNEVEIIKNSSQIKIRSMLIRISDKNSNSFNI
SWNYKDENLANYVMSIIDNILPE
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgataaaaataataccgcttggtgcaggtcaagatgttggacgtagctgtattcttata
tccattggtgatgatagtacaggaataaaaaatttaatgtttgattgtggaatgcacatg
ggatacaatgacgaaagaagatttccggatttttcatatatttctaaaacaaaccgattc
acagaacaattagattgtattatagtaagccattttcatttggatcattgtggtgctttg
ccatattttactgaaatgtgtggatatgaaggacctatttttatgacacatccaactaaa
gctatttgtcccattttacttgaagattatcgaaaaattactgttgaaagaaaaggagaa
acgaatttttttacatctcaaatgattaaagattgtatgaagaaggttactgctgtcaat
cttcatcaaacaattaaagttaatggtgatgatgatttggaaattaaagcattttatgct
ggacacgttttaggagcggctatgttttatgtacgagtaggtacacaatcagtagtttat
actggtgattataacatgactcctgaccgacatttgggtgcagcatggatcgataaagta
cgtccagacttgttaataacagaatcaacttatgccacaactattcgcgattctaaaaga
acacgtgagcgtgattttttgaaaaaagttcatgattgtgtcacacaaggaggcaaagtt
cttataccagtctttgctcttggacgtgctcaagaactttgtatcttaattgaaacatat
tgggagagaaataatcttaatgtacccgtatatttttctgctggtatgaccgaaaaagcc
aatgattattataaactttttattaattggacaaatgagaaaataaaaaatacttttgtt
caacgaaacatgtttgattttaaacatatcaaaccttgggatagacaatatttggattta
ccaggtcctgcagttttatttgctactcctggtatgttacatattggtacatctttggaa
gtctttaaaaagtgggcaccatatccagaaaatatggtaataatgcctggatattgtgta
gcaggtactgttggagctaaagttcttaatggggataaagaaatttatatagatgcatat
aataagataaatgtaaagttacaagtaaaaaatttatcattcagtgcacatgcagatgct
aagggaattttacaacttataaagcaatgtgatccaaaaaatgtaatgttagttcatgga
gaaaaagcaaagatggaatttttacaggaaaaaattaaacgagaatgtcgaataccatgt
tattcaccagctaatggagaaacaacaattattgatacaccactttctataccagttgat
gtttctgttgatttacttaaacgtcatttaacagcacaaaaacttcctttacccacatca
gatgataaaattgatatcacaaagatcaaaccagtgaatggaattcctatacaaggtatt
ttgacgatggaacctgatcaaataccaaaattaatggatgtaaacgaagcgataagggat
acaaatttaccattacgtgagttaacatttgaatttattaaatcatttgatccgaataag
attgatacttcaactcgaactgatattcgcactcaagctttggaaaatgtatatgaaaaa
gtgagaaaagctcttaaagatgatgtgaatgaagttgaaataattaagaattcatcacag
ataaaaataagaagcatgttaataagaatatctgataaaaattccaactcttttaatatt
tcatggaattataaagatgagaatttggcgaattatgtgatgtcaataattgataatatt
cttcctgaatga
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