Rhizophagus irregularis: OCT59_011139
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Entry
OCT59_011139 CDS
T10295
Name
(RefSeq) uncharacterized protein
KO
K08735
DNA mismatch repair protein MSH2
Organism
rie Rhizophagus irregularis
Pathway
rie03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rie00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
OCT59_011139
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rie03400
]
OCT59_011139
DNA repair and recombination proteins [BR:
rie03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
OCT59_011139
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_II
MutS_IV
MutS_I
NagJ_C
Histone_HNS_N
Motif
Other DBs
NCBI-GeneID:
36864735
NCBI-ProteinID:
XP_066000951
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All DBs
Position
19:complement(2733304..2738476)
Genome browser
AA seq
943 aa
AA seq
DB search
MLTFFLRFNKNMANPIKDRPDLTFESKQGEQGFFAFINGLPQKSSNTIRLFERSNGDYYS
VHEDDALYIAQNIYNTSSVIRYLGKNKVPSCTLSRLTCDTFLRDALLNKQLKIEIWAQGS
KGLWKLVKNASPGNIQAFEDHLFSNVEISASPIVLSVKLGIRGDQRMVGVSFADTTIREL
GVSEFIDNELFSNFESLLAQLGVKECVIPADESRKDYDLSKLRDIIEKFDIVITERKKSD
FTIKNIEQDLNRLLGDDVSAATLPEFEMKHAMTACASLIKYLSLMTDDSNFGHYILRHHD
LSQYMKLDASALRALNLMQSPQEGSNKNSSLFGLLNKCKTAQGSRLLCQWLKQPLMDIKE
IELRHSLVEIFAEDTELRLSLREEHLKSIPDLHRLSKRFQKRIASLQDVIRVYQVIIKLP
KLIEALELFDSMNDSSKELIEEIYNAKLKEHYSELEKYQEMVETTIDLEAADYHQFMIKA
DFNSELKQIQNKIDGIKEKINEEHEKVGEDLCMDTDKKLHLEKQNVYGYCFRITRNDATC
IRGKKQYHELSTQRGGVYFTTDKLRQLSTSFHDNLGLYEKEQNTLVKEVIEIAASYCPAL
ETLNGLMAHLDVILSFAHVAVHAPVPYIRPKMYNKGEGNVVLKNARHPCIEVQDDVSFIP
NDVSLIRDQKELLIITGPNMGGKSTYIRQIGVIALMAQTGCFVPCTEASLCVFDCILARV
GAGDSQLKGVSTFMAEMLETANIIKTATTNSLIIIDELGRGTSTYDGFGLAWAISEYISK
KIRCFCMFATHFHELTALTEEVPYAYNLHVTAHIGVNPSGGRDITLLYKVKEGICDESFG
IHVAELANFPDTVVKLARRKEKQLEDVTKHENTMEIDGKTTFSKEEIEEGSTIIEEFMKE
IANTPNIESMDYQSIIERISIVRNKYQERIESNSWCQDVIAGF
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
atgttaactttctttctacgctttaataaaaatatggcaaatccaataaaagatagacca
gatttgacgtttgaaagcaagcaaggcgagcaaggtttttttgcttttataaatggactt
ccgcagaaatcgagtaatactatccgattatttgagagaagtaatggggattattatagt
gtccatgaagatgatgctttatatattgcacaaaatatctataatacttcctctgtgatt
agatatttgggtaaaaataaagtccccagttgtacattatcacgtttaacatgtgacaca
tttttacgtgatgcattattaaataaacaattgaaaattgaaatttgggctcaaggatca
aagggtttatggaaattagtcaaaaatgcttctccaggaaacatccaggcatttgaagat
catttgttttctaacgttgaaatttcagcctcacctatagtattatcagttaaattggga
atacgaggtgatcaaagaatggttggagtttcatttgctgatacaacaataagagaatta
ggcgtatcagaatttattgataatgaattattttcaaattttgagtctttacttgctcaa
ctcggagtgaaagaatgtgttattccagcagatgagtcacgtaaagattatgatttatcg
aaattaagggatatcattgaaaaatttgacattgttatcactgaacgcaaaaaaagcgat
tttacaatcaagaatattgaacaagatcttaaccgtttgttgggtgatgatgtatctgcc
gcgactcttcctgaatttgaaatgaagcatgctatgactgcttgcgcaagtctcattaaa
tacctatcgctcatgactgatgatagtaattttggtcattatattctgagacatcatgat
ttgtcacaatatatgaaattagatgcttcagcattaagggcattgaatttaatgcaaagt
ccacaagaaggctccaataagaattctagtttgtttggtcttttaaataaatgtaagact
gctcagggttctagattattatgccaatggctgaaacaaccattgatggatatcaaagag
atagaattaagacattcattggtagaaatctttgcggaagatacggaacttaggttatct
ttacgcgaggaacatttgaagagtatacctgatcttcatcgcttatcgaaacgattccaa
aagagaatagcatcgttacaggacgttatacgagtctatcaagtaataataaagttgccc
aagttaattgaagctctagaattatttgattctatgaatgactctagcaaagaacttatc
gaggaaatatataatgctaaactcaaagaacattacagtgaacttgagaaatatcaagaa
atggttgaaaccacaattgatttagaagctgcagattatcatcaatttatgattaaagct
gattttaattcagagttaaaacaaattcagaataaaattgatgggatcaaagaaaaaatt
aacgaagagcatgagaaggtcggagaagatctttgcatggatacggataaaaaattgcat
cttgagaaacaaaacgtttatggatattgtttcagaattactcgaaatgatgcaacttgt
attcgtgggaaaaaacagtatcatgaactttctacacagcgtggtggtgtttactttaca
acagataaattgagacaattgagtacatcgtttcatgataatttaggattatatgagaaa
gagcaaaatacattggttaaggaagtaattgagatagcagcatcctattgtcctgctttg
gaaactttgaatggattaatggctcaccttgatgttatacttagttttgcacatgttgcg
gttcacgcacccgtaccatacattcgccccaagatgtataataaaggggaaggaaacgtt
gtcttgaaaaatgctcgccatccttgtatagaggtgcaagatgacgtttcgtttatacca
aacgatgttagcttaataagagatcaaaaagaattattaattatcactgggccaaatatg
gggggaaaatcaacctatatccgacaaattggtgttattgctttgatggcacagactggc
tgttttgttccttgtacagaagcaagtctttgtgtatttgattgtatccttgcaagagtg
ggtgctggcgatagccaacttaaaggtgtatctacatttatggcggaaatgttggaaaca
gcaaatattataaagactgcaacgaccaattctttgataattatcgacgagcttggaaga
ggaactagtacttatgatggatttggtttagcttgggcgatttcagaatatatttcgaag
aaaattcgatgcttttgtatgtttgcaacgcattttcatgaattgacggcattaacggaa
gaagttccttacgcatataatttacatgttacggcacatattggggtaaacccttcaggt
ggacgagacattacattattgtacaaagtcaaagaaggtatttgtgatgagagtttcggt
attcatgtcgcagaattggcaaattttcccgatactgttgtcaagcttgcgagaagaaaa
gagaaacaattggaggatgttactaaacatgaaaacacgatggaaattgatggtaaaact
acgttttctaaagaagaaatcgaggaaggaagcactattatcgaagaattcatgaaagaa
atagcaaatactcctaacattgaatctatggattatcaatcaataatagaacgtatttct
atagttagaaataaatatcaagaaagaattgaaagtaactcatggtgtcaggatgttatt
gctggattctga
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