Rhizophagus irregularis: OCT59_012160
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Entry
OCT59_012160 CDS
T10295
Name
(RefSeq) uncharacterized protein
KO
K13345
peroxin-12
Organism
rie Rhizophagus irregularis
Pathway
rie04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
rie00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
OCT59_012160
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rie04121
]
OCT59_012160
Ubiquitin system [BR:
rie04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Peripheral membrane proteins
OCT59_012160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pex2_Pex12
zf-C3HC4_2
zf-C3HC4
zf-C3HC4_4
zf-RING_UBOX
zf-C3HC4_3
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
36864718
NCBI-ProteinID:
XP_025185271
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Position
2:complement(3608723..3610253)
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AA seq
371 aa
AA seq
DB search
MEFMSDISSGADIYRPSLFELLAQEKLRALIQPAVRYILSVYAQRYPRYLLRIVNRFDEF
YAVAMLLIERQYLKNYYASFAESFYGLKRIRLINTKIDLPEAAPDVDLQKLRNSDMWRSL
FFLVGIPYIKTKLDDLYEKVSENARVRLLGGTFSRVHNERQLNCKERVHRFIRNLFKILY
PWLNALYHGSILLYNVLYLYDKTRCYTPWLSLMGIEVRRMSAQDYFERRLNSTRNNLSTK
TLLQATRNFLSIILSDLLNFLKSLLQMSIFFSRFLEWWYSSEYARRPGIENRVDVPPPDI
IAPDPRGIPLPESPNVCPICTNLLTNTTALPSGYVFCYPCIFSYIEDYERCPITLIKVDI
NELRKVYNPSA
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atggaatttatgagtgatattagctcaggtgccgatatatatcggccctctttgttcgaa
ttattagcacaagaaaagttgcgagcgcttattcaaccagctgtcagatatattttatcg
gtttatgctcaacgatatcctcggtatttgcttcgtatagttaatcgatttgatgaattt
tatgctgtcgctatgttattgatagaaagacaatacttgaaaaattattacgcatctttt
gctgagagcttttatggattgaaaagaattcgattaataaatacaaaaatcgatttaccg
gaggcagcaccggatgttgatttacaaaaattgagaaattctgatatgtggcgatcctta
ttttttttggttggaattccatacataaaaacaaaacttgacgatttatatgaaaaagtt
agtgaaaacgcacgtgtaagattactaggtggcacattttctcgagtacataatgagaga
caacttaattgtaaagagcgcgtacatcgtttcatacgaaatttattcaagatactttat
ccatggttgaatgctttatatcatggttcaatactattatataacgttctatatctatat
gataaaacacgttgttatacgccttggctaagcctaatgggtatagaagtccggagaatg
agtgcgcaagattactttgaacgaagattaaattcaacaagaaataatttatcaacaaaa
acattacttcaggccactcgcaactttttaagtataattttatcagacttgttaaacttt
ctcaaaagtttattgcagatgtctatattcttttccagatttctggagtggtggtattcg
agcgaatacgcaagacggcctggtattgaaaatagagtagatgtgccacctcctgatatt
atagcgcctgatccgcgaggaattccgcttccagaatcacctaatgtatgtccaatttgt
acgaaccttctaactaatacgacagcacttccgtctggatatgttttttgctatccttgt
atttttagctatattgaagattatgagcgatgtccaataactttaatcaaagttgatatt
aatgaattaagaaaggtgtataatccctctgcataa
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integrated database retrieval system