Rhizophagus irregularis: OCT59_013103
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Entry
OCT59_013103 CDS
T10295
Name
(RefSeq) uncharacterized protein
KO
K15559
regulator of Ty1 transposition protein 103
Organism
rie Rhizophagus irregularis
Brite
KEGG Orthology (KO) [BR:
rie00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rie03021
]
OCT59_013103
Transcription machinery [BR:
rie03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
OCT59_013103
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CID
DUF7711
DUF1848
DUF1059
RNase_E_G
CREPT
Motif
Other DBs
NCBI-GeneID:
36866277
NCBI-ProteinID:
XP_066001473
LinkDB
All DBs
Position
20:complement(2354508..2356277)
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AA seq
356 aa
AA seq
DB search
MYHRRHVATSVDIWNRELRKASSARKVSFIYLCNDVCQNSRRKGPEFIREFRKVLPDAVE
HAYRHATADVQNKIRRVVNIWEEREVFDRDFLNELRKRFAGTNSPQLGSSNAKRAIDKQI
KTSIPTTPPPGRSDIAKLVTTTHNIVESESIIQEYGRKVTKLWTEVMEAEEKPSPSILSQ
QLDYLLRVLTEHQNLITRNITNRTQFIIQMKEIIAQEEMKLRMDNKNLLDTQSKINETKE
CSEQLKAITEFSTISIMDEHNKQQHQMEQIPEIKREESRENNNSVYDPTSHLILPPTSFA
ADILPPSETQLFGDSLINNYLQLPYQTTSISSSISNSPAPSNTSDEHSDPLVSADT
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgtatcatcggcgacatgtagcaactagtgttgatatttggaaccgtgagttgcgaaaa
gcaagctcagcgcggaaagtatcattcatatatctttgtaatgatgtctgtcaaaatagt
cgtcgcaaaggtccagaattcatacgagaatttcgtaaagtgcttccggatgccgttgaa
catgcttatcgtcatgcaaccgcagatgttcaaaataaaataaggcgtgttgtcaatatt
tgggaggaacgggaagtctttgatagggattttctaaatgaattacggaaacgtttcgca
ggaacaaattcaccacaattaggaagttctaatgcaaaaagagcaatagacaaacaaata
aaaacaagtattcctacgacaccacctcctggacgttccgatatagccaaattagtgacg
accacacataatattgtagaatcagaatctattattcaggaatatggaaggaaggtaaca
aaactttggacagaagtaatggaagcagaagaaaagcctagtccgtctattctttcgcaa
cagcttgactatcttctacgagtgctgacagaacatcaaaatttaattacaaggaatatt
accaatcggacacaattcatcatccagatgaaagaaataatagcacaagaagaaatgaag
cttagaatggataacaaaaatcttttagatactcaaagcaaaattaatgaaactaaagaa
tgttctgaacaattaaaagctattacagaattttcaacaatctccattatggatgagcat
aataaacagcagcatcaaatggaacaaattcctgaaattaaacgagaagaatccagagaa
aataacaattcagtttacgaccccaccagccatttaattcttccgcctacatctttcgct
gctgatattttgcctccatctgaaactcagttgttcggagattcattaattaataattat
ttgcaacttccatatcaaactacatctatttcttcatcaatatctaattcgccagcacct
tctaatactagtgatgagcatagtgatcccttagtttctgcggatacatga
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