KEGG   Rhizophagus irregularis: OCT59_013108
Entry
OCT59_013108      CDS       T10295                                 
Name
(RefSeq) uncharacterized protein
  KO
K12881  THO complex subunit 4
Organism
rie  Rhizophagus irregularis
Pathway
rie03013  Nucleocytoplasmic transport
rie03015  mRNA surveillance pathway
rie03040  Spliceosome
Brite
Messenger RNA biogenesis [BR:rie03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     OCT59_013108
    TREX complex
     OCT59_013108
Spliceosome [BR:rie03041]
 Complex C
  Other components
   EJC/TREX
    OCT59_013108
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    OCT59_013108
SSDB
Motif
Pfam: RRM_1 FoP_duplication WD40_MABP1-WDR62_1st
Other DBs
NCBI-GeneID: 36866281
NCBI-ProteinID: XP_025181612
LinkDB
Position
20:complement(2372456..2374641)
AA seq 218 aa
MSAGLDMSLDEIIAKKRPSRGARTGGPTRTGGIAKRSGGPVRNPRSSQVRPRPYSNTAAT
ASSNLNASPEGKILVSNLAYKVTEADLWELFSTMIGPVRQVNLNFDQSGRSKGTASVVFA
RKNDAVRSVEKLRNITLDGREMKIEIVVAPNVGPITQRIGGINESRPSTRGTGGSRGTPT
RGGRGGRGGRRSDNRPKKTQEELDAEMSEYMQIDEVIN
NT seq 657 nt   +upstreamnt  +downstreamnt
atgtccgcaggtttagacatgtctcttgatgaaattattgcgaaaaaaaggccatcaaga
ggagctaggaccggaggtcctacccgtacaggtggcatcgctaagcgttctggcggtcct
gtcagaaatcctcgatcttcacaagttagacctcgaccttacagtaatactgctgctacg
gcatcatcaaatctcaacgcatcaccagaaggaaaaattcttgtttcaaacctcgcctat
aaagtcacagaggcagatctttgggaacttttctcaacgatgatcggtcctgtacgccaa
gttaaccttaactttgatcaaagtggtcgctcaaaaggtactgcatccgttgtttttgca
aggaaaaatgacgccgtacggtccgttgaaaaacttaggaatattactcttgatggccgt
gaaatgaagattgaaattgttgttgctcctaacgttggtccgattactcagcgtattggt
ggaatcaatgaatctcgcccatccacacgtggtaccggaggatctcgtggcacccccaca
agagggggtcgagggggtcgaggaggtcgtagatctgataataggcccaaaaaaacacaa
gaagaattggatgctgagatgagcgagtatatgcagattgatgaggtgataaattga

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