Rhizophagus irregularis: OCT59_013544
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Entry
OCT59_013544 CDS
T10295
Name
(RefSeq) uncharacterized protein
KO
K01968
3-methylcrotonyl-CoA carboxylase alpha subunit [EC:
6.4.1.4
]
Organism
rie Rhizophagus irregularis
Pathway
rie00280
Valine, leucine and isoleucine degradation
rie01100
Metabolic pathways
Module
rie_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
Brite
Enzymes [BR:
rie01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.4 methylcrotonoyl-CoA carboxylase
OCT59_013544
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Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
Biotin_carb_N
Biotin_carb_C
Biotin_lipoyl
ATP-grasp
Dala_Dala_lig_C
Biotin_lipoyl_2
ATPgrasp_ST
ATP-grasp_3
GARS_A
Lipoprotein_17
NlpE
ATP-grasp_IQCH
Motif
Other DBs
NCBI-GeneID:
36862747
NCBI-ProteinID:
XP_066001721
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Position
21:complement(516350..519909)
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AA seq
724 aa
AA seq
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MSTRYLLYTHTKANNFTSFIRNNIIYNVHNVPFTVYNRRFFSSIERKPLFDKILIANRGE
IACRVMRTAKKLGVKTVAVYSEADRNALHVKMAYEAYLIGPAPSAESYLNINKIISAAKM
SNSQAIHPGYGFLSENPNFAELLTKENITFIGPPASAIMSMGSKSESKDIMIAADVPVVP
GYHGINQDPQFLKQKASEIGYPVLIKAIKGGGGKGMRIVNDPSEFDIQLESSKREAMKSF
GDDQVLIEKYLLTPRHVEVQVFADMQGNVVHLFERDCSVQRRHQKILEEAPAPGLSDEIR
MELGAKAVAAAKAVNYVGAGTVEFIMDNVDKKFYFMEMNTRLQVEHPVTEMVTSTDLVQW
QLEVASGNPLPATQKDLRLEGHAFEARIYAENPANNFLPDTGPLLHLRTPSPSPNVRIET
GFEQGDEINVHYDPMIAKLVVKGQNRTEALGILKRALNGYEVVGLNTNIEFLKSVVSHDA
FIAGEVETGFIAKHNEELFRSKETPPHVIIQASLSLILSELQNITNENISPFDPFSPWTS
LPFSRLNTNHVQTIRFYDDKEGDINVKMRFNNDNSFDITIVRGGLNPIVFKSVLGSWNEA
EQQIIAEIENHRVKSHVILEKNSKVVIFDNEGKRVLKIPEPSYLQSKLADVAGSIKTPMP
CKISQVFVKPGQIVEKGAPLVVLEAMKMEHLIKSPTTGKVEKIFYNVGDFVEENKNLVNI
VVEN
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgtcgactcgttatttattatatacacatacaaaagctaataactttacttcttttatt
cgtaataatataatatataatgtccacaatgttccattcactgtttataatcgtcgtttc
ttctcaagcatagaacgtaaacctttattcgacaagattttgatcgcaaatcggggtgaa
attgcttgtcgcgtaatgcgaacagctaagaaattaggtgtaaaaacagtagctgtttat
agcgaagcagatagaaatgctttacatgtaaaaatggcatatgaagcatatttaatagga
cccgcaccatcagcagaaagttatttaaatatcaacaaaatcatatctgctgcaaagatg
agcaattctcaggctattcatccgggatacggatttttatctgaaaatccaaatttcgct
gaactcttaacaaaagagaatataacatttattggtccaccagcatctgcaattatgtca
atgggctctaaaagtgaatcaaaagatattatgattgctgcagatgttcctgttgttcca
ggatatcatggtataaatcaggatcctcaatttctaaaacaaaaggcttcggaaattgga
tatccagtattaatcaaagcaattaagggaggtggcggtaaaggaatgcgtatcgtaaat
gatccatcagagtttgatattcaacttgaatcatctaaaagagaagcaatgaagtctttt
ggagatgatcaagtacttatagaaaaatatcttttaactcctcgtcacgttgaagtacaa
gtctttgctgatatgcaaggaaacgtagttcatctttttgagagagactgttctgttcaa
agaaggcatcaaaaaattcttgaagaagcaccggcaccagggttaagcgatgaaataaga
atggaacttggtgcaaaagctgttgcagcagctaaagctgtaaattatgttggtgctggt
actgtagaatttattatggacaatgtagataagaaattttatttcatggagatgaatacg
agattacaagttgaacatcctgtcacggaaatggtcacttctacagacttggttcaatgg
caattagaagttgcttcgggtaatcccttacctgctacacaaaaagatttaagacttgaa
gggcatgcttttgaagcgcgtatttatgcagaaaatcccgcaaataattttcttcctgat
actggccctttacttcatcttcgtacaccatctccatcgccaaatgttcgaattgaaact
ggttttgaacagggtgatgagattaatgttcactatgatcctatgattgcaaaattagtt
gtaaaaggtcaaaatcgtacggaagctttggggattttaaaaagagctttaaatggatat
gaggttgttggcttaaatactaatatcgaatttttgaaaagtgttgtttcacacgatgcc
tttattgctggagaggttgaaacgggctttatagcgaaacataatgaagagctatttaga
tcaaaggaaacacccccgcatgttattattcaagcttcgttatcacttatattaagtgaa
cttcaaaatattacgaatgaaaatattagtccttttgatccattttcaccttggacttca
ttacctttctctcgtttaaataccaaccatgttcagactattagattttatgacgataag
gagggtgacattaatgttaaaatgagattcaataatgataattccttcgatattactatt
gttaggggtggtttaaatccgattgtatttaagagtgtacttggtagttggaatgaagcg
gaacaacaaataatcgctgaaattgaaaatcatcgagtgaagagtcatgttatcttagaa
aagaattctaaagttgtcatttttgataacgaaggtaaaagagtattaaaaattccagaa
ccttcttaccttcaatctaaattagctgatgtggctggctctataaaaactccaatgcca
tgcaagatatctcaggtctttgtaaaaccaggacaaattgtcgaaaagggagcgccattg
gtagtactagaggctatgaaaatggagcatttgatcaaatcaccaacaacgggaaaagtt
gaaaaaatattttataatgtcggagactttgttgaagaaaataagaatttagttaatatt
gtcgttgaaaattga
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