Rhizophagus irregularis: OCT59_013861
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Entry
OCT59_013861 CDS
T10295
Name
(RefSeq) uncharacterized protein
KO
K13091
RNA-binding protein 23/39
Organism
rie Rhizophagus irregularis
Brite
KEGG Orthology (KO) [BR:
rie00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rie03041
]
OCT59_013861
Spliceosome [BR:
rie03041
]
Common components
Common spliceosomal components
General mRNP proteins
OCT59_013861
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_3
RRM_occluded
RRM_7
Motif
Other DBs
NCBI-GeneID:
36859847
NCBI-ProteinID:
XP_066001885
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All DBs
Position
21:complement(1879667..1882509)
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AA seq
471 aa
AA seq
DB search
MADDFDVEAMLEAPFHKGQEINEFTTNGKAEKQNKEERKSEERRRHRSSSRTSSHRHRSH
SRSRRSRKSRSRSRDRRRRHRSRTRSRERRRRSRTRSRERKRRSRSPRRRSRSRSRFSDR
RRRSPTPPLDEEERDKRTVFVMQLAARLRSRELADFFATVGKVRDAKIIADRISRRSKGV
GYVEFYDEESVPKALALTGQKLLGIPVIVQLTEAEKNRQARLAEQAASHATDIAYHRLYV
GSVHFNLTEDDLRQVFEPFGPLEFVNLHKDPETGRSRGFAFIQYKNPEDAKQALEKMNGF
ELAGRTIKVGLVTDKSNGMNLNLDDGDVAGLALNAQSRVELMQKLARDTDLIAPTATPIQ
SEPPRPVQPRVNPTRCVLLKNMFNPDEETESNWAEELEEDVKSECIKYGPVVHISVDRES
AGDIYMKFDSVSSAQAAVNGLNGRWFGGNQISAVFILDMFYNVRFPKAANL
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atggctgatgattttgacgtcgaagctatgctagaggcaccttttcataagggccaggaa
attaatgagttcactacaaatggtaaagctgaaaaacaaaacaaagaagaaaggaaaagt
gaagaacgaagacgccaccgaagttcttcacgaacctctagtcaccgccatagatcacat
tcaagatctcgtcgctcacgtaaatcacgttctagatcacgagatagacgtagaagacat
cggagtaggactaggtcgcgtgagagacgaagaagaagtcgaactcgttctagagaaaga
aagaggagaagtcgtagtccacgtagaagaagtcgtagcagaagtagatttagtgaccga
cgccggagatcaccaactccccctttagatgaagaggagcgtgacaagcgaacagttttt
gtcatgcaactggctgcacgtcttcgttctcgtgaacttgctgatttttttgcaaccgtt
ggaaaagttcgtgatgcaaaaataattgcagatagaatatcccggaggtcaaaaggggtt
ggttatgttgaattttatgatgaagaatctgtcccaaaagctttggctttgactggacaa
aaacttttaggcattccagttattgtccaattaaccgaagcagaaaagaatcgacaagca
aggctggcagaacaggcagcttcgcatgcaactgatattgcatatcacagactttacgtc
ggttctgttcatttcaatttgacagaagatgatctaaggcaagtttttgaaccgtttgga
cccttagaatttgtcaatcttcataaagatcccgaaacaggacgatcacgaggttttgct
ttcattcaatataagaatccagaggacgcaaaacaagcgttagagaaaatgaacggattt
gaattggctggaagaacaatcaaagtaggtctagttactgacaaaagtaacggcatgaat
ttaaatcttgatgatggcgatgttgctggtttagccctcaacgcacaatcacgtgttgaa
ttaatgcaaaaattagcacgtgatacagatttgattgctccaaccgcaactcctattcaa
tcagaacctccgcgcccagttcaacctagagtaaatccgactcgttgcgtcctattgaaa
aatatgtttaatcctgacgaagaaactgagtcaaactgggctgaagagcttgaggaagac
gtgaaaagtgaatgtataaaatacggacctgttgtccatattagtgttgatagggagtcg
gcaggggatatttatatgaaatttgatagtgtatcgtccgctcaggctgcagtgaacggt
cttaatggccgatggtttgggggaaatcaaatatcggcagttttcattctcgatatgttt
tataacgttcggtttcctaaagccgcaaatctataa
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