Rhizophagus irregularis: OCT59_013914
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Entry
OCT59_013914 CDS
T10295
Name
(RefSeq) uncharacterized protein
KO
K10858
DNA mismatch repair protein PMS2
Organism
rie Rhizophagus irregularis
Pathway
rie03430
Mismatch repair
rie03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
rie00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
OCT59_013914
03460 Fanconi anemia pathway
OCT59_013914
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rie03400
]
OCT59_013914
DNA repair and recombination proteins [BR:
rie03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
OCT59_013914
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_mis_repair
MutL_C
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
36865921
NCBI-ProteinID:
XP_025182501
LinkDB
All DBs
Position
21:2237201..2240766
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AA seq
865 aa
AA seq
DB search
MSVKAIDTSSIHRICSGQVILDLTTAVKELVENSLDAQAKSIEIRFKEYGIQSVEVIDDG
IGIHHNDYESLALKYHTSKLSCFEDLTEINSFGFRGEALSSLCALSKLVVSTCTQEETPT
GTKLEYDSHGRLIKKSPIARERGTSVFLQGLFEPVPVRHREFKKNIKREFGKALVLLQAY
GIICENVRISCTNQLNNNAKTRVLTTSGNNDLRDNIANIFGAKTLTQIIPLNINMNVKRD
MRLQKNEYDESEGYTAHIVGYISKPMKGYGRGSNDRQYYFINGRPCNLPKMAKAVNELYK
SFNTHQYPFVVIDFRLAKSSYDVNVSPDKRTIFIHNEIKIVEIVREELNNVLEPFRSTFA
YSNVGGVQLSIEENVLCHGNSKKEISSQNKNAQYRSGILLVQDRDDGIVRLNNIQSNESV
KSEEYKFANCTTQSEGSEVHVMKKLKISAEKSEIVSSPKKNLSQLLSSNTPKKRNYIIKP
IDTYLVNDRKDSFNVSASISCDDKHRGENVDKADIEEEEQMEMIVEDFVEVLEDDMNDSN
KGVIIADDKNAFNKNLIISKEDNKILSFSSKTLDLETVMIESDYERQDIEIPFDIRRYKL
IDTNQQDFCKYKYKNNDRDTHLNNSGIDTQDNEVAERELSRVILKRDFGLMEIIGQFNLG
FIIVKLDNSNCNDLFIIDQHASDEKYNFENLQHHTKIQSQRLISPRKLDLTAAEELIAIE
NLKILQANGFELDVDYNASPTNKLKLLAQPMSKDIIFGVKDLEELIFLLSERPGEMVRCS
HIRNMFASRACRKSIMIGDALSRQQMGKIVKHMGDIDQPWNCPHGRPTMRHLFDLSKARS
SQPYTMRPKSNQSNLYKLFRNTCNS
NT seq
2598 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtcaaagcaattgatacttcttcgattcatcgaatttgttcaggccaggtaatc
ttggacttaacaacagcagtaaaagagcttgtagaaaacagtcttgatgctcaggcaaaa
tcaattgaaatcagatttaaagaatatggcatccaatccgttgaagtaatagacgatggg
ataggaattcatcataatgattatgaaagcctagctctcaagtatcacacatccaaacta
tcttgctttgaagatttaacagaaatcaactcatttggctttagaggcgaagcacttagt
tctttgtgcgctctatccaaacttgtagtctcaacatgcactcaagaagaaactccaacg
ggtaccaaattggaatatgattcacatggaaggctcataaaaaagtctccaatagctcga
gagcgaggcacgtccgtattcttacaaggactttttgaaccggttccagttcgacaccgt
gaatttaaaaagaatattaagcgagaatttggcaaagcactagtattattgcaagcttat
ggtatcatttgcgaaaatgttagaatttcttgtacaaatcagttaaataataacgcaaaa
acaagagtgttaactacaagtgggaacaatgacttaagagataatatcgcaaatatattt
ggtgccaagacattaactcaaataataccattgaacataaatatgaatgtcaaacgagat
atgagattgcaaaaaaatgaatatgatgaaagtgaaggatatactgctcatattgttggt
tatatttctaaacctatgaaaggatacggccgtggaagcaatgataggcaatattacttc
attaatggtcgtccatgcaatttaccaaaaatggcgaaagctgttaatgagttatataaa
agttttaacactcaccagtatccttttgttgttattgattttcgacttgcgaaatcttcg
tatgatgttaacgtcagcccggataaaaggacaatatttatacataacgaaatcaaaata
gtagagatagtaagggaagaattaaataatgttctggaaccatttcggtctactttcgcg
tattctaatgttggaggcgtgcagttgtcaatagaagaaaatgttttatgtcatgggaat
tcaaagaaggagatttcttcacaaaacaaaaatgcccaatataggagtggaattttactt
gtgcaagacagagatgatggtatagtcaggctcaataacattcaaagcaacgagagcgtt
aaaagtgaagagtataagtttgcgaattgtactactcaatcagagggaagtgaagttcat
gtaatgaaaaagctaaagatttctgctgaaaaatcagagattgttagttctccgaaaaaa
aatctatcacaattattatcttcaaatacgccgaaaaaaagaaattatattattaaacca
attgatacctacttagttaatgaccggaaggattctttcaatgtttcagcgtctatatca
tgtgatgataaacatcgcggtgaaaacgttgataaagctgatatcgaagaagaggagcaa
atggaaatgatcgtcgaagattttgttgaggttcttgaagatgatatgaacgattctaat
aaaggtgttatcatagccgatgataagaatgcttttaacaagaatctcataatctctaaa
gaggataataaaattttgagtttttcaagtaagacacttgatctagagactgttatgata
gagagtgattacgaaagacaagacattgagataccatttgatattcgaagatataaattg
attgatacaaatcagcaagatttttgcaagtataaatataaaaataacgatcgcgataca
catttaaataattccggaatcgatactcaagataatgaagttgctgaaagagaactcagt
agggttatattgaaaagagatttcggcttgatggaaattatagggcaattcaatctcgga
tttattattgttaaattggataattctaattgtaatgatttgtttattattgatcaacat
gcatctgatgagaaatataactttgaaaatttacaacatcatactaaaatccaatctcaa
agacttatcagtccaagaaagttagatcttactgcagcagaggaattaattgcaatagaa
aacttaaaaatcctacaagcgaatggatttgagttggatgtagattacaacgcatctccc
actaataaattaaaattattggcgcaaccgatgagcaaagatataatattcggagttaag
gatttagaagaattaatatttctattatctgaacgaccgggagaaatggtacgttgttca
cacatcagaaatatgtttgcgtctagagcttgtcgcaaatctataatgattggagatgca
ttaagtcgtcaacaaatgggaaagattgtaaaacatatgggtgatattgatcaaccatgg
aattgtcctcacggtcgaccaaccatgagacacctttttgatttgtcaaaggcacgaagt
tctcaaccatatacaatgcgtcctaaaagcaatcaaagcaatttatacaaattgtttaga
aatacatgtaatagttaa
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