Rhizophagus irregularis: OCT59_014334
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Entry
OCT59_014334 CDS
T10295
Name
(RefSeq) Rho GTPase protein rac1
KO
K04392
Ras-related C3 botulinum toxin substrate 1
Organism
rie Rhizophagus irregularis
Pathway
rie04145
Phagosome
rie04148
Efferocytosis
rie04620
Toll-like receptor signaling pathway
rie05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
rie00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
OCT59_014334
04148 Efferocytosis
OCT59_014334
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
OCT59_014334
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
OCT59_014334
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rie04131
]
OCT59_014334
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rie04147
]
OCT59_014334
04031 GTP-binding proteins [BR:
rie04031
]
OCT59_014334
Membrane trafficking [BR:
rie04131
]
Exocytosis
Small GTPases and associated proteins
Rho GTPases
OCT59_014334
Endocytosis
Lipid raft mediated endocytosis
Arf6-dependent endocytosis
OCT59_014334
Macropinocytosis
Ras GTPases
OCT59_014334
Others
NADPH oxidases (Nox) and associated proteins
Nox associated proteins
OCT59_014334
Exosome [BR:
rie04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
OCT59_014334
Exosomal proteins of other body fluids (saliva and urine)
OCT59_014334
Exosomal proteins of colorectal cancer cells
OCT59_014334
Exosomal proteins of bladder cancer cells
OCT59_014334
GTP-binding proteins [BR:
rie04031
]
Small (monomeric) G-proteins
Rho Family
Rac/Cdc42 [OT]
OCT59_014334
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
GTP_EFTU
Motif
Other DBs
NCBI-GeneID:
36869216
NCBI-ProteinID:
XP_025175046
LinkDB
All DBs
Position
22:448861..450365
Genome browser
AA seq
192 aa
AA seq
DB search
MQAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPINLGLWDTAG
QEDYDRLRPLSYPQTDVFLICFSLVSPPSFENVRGKWYPEITHHAPNIPIILVGTKLDLR
EDKETILKLRQKAQSPITYPQGLQMAKDIQAVKYLECSALTQKGLKNVFDEAIRAVLCPV
PVVGRKSKCMVM
NT seq
579 nt
NT seq
+upstream
nt +downstream
nt
atgcaagctatcaagtgtgttgtggttggtgatggtgctgtcggtaagacatgtctctta
ataagttataccacaaatgcttttcctggagaatatattccaaccgtatttgataattat
tcagcaaacgtaatggtcgatggaaagcccatcaaccttggtctttgggatactgctggt
caagaagattatgatcgtttacgcccactctcatatcctcaaactgacgtattcttgatt
tgcttctctttagtcagccctccttccttcgaaaacgttcggggaaagtggtatcctgaa
attactcaccatgcccccaatattccaattatccttgttggtactaagctcgatcttcgt
gaggataaggagaccatccttaagctgcgacaaaaagctcagtccccaattacatatcca
caaggccttcaaatggcaaaagatatccaagctgttaaatatcttgaatgttctgctctt
acccaaaaaggattaaaaaacgtttttgatgaagccattagggccgtactttgtcctgtc
ccagtagtaggcagaaagagtaaatgtatggttatgtaa
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