Rhizophagus irregularis: OCT59_014617
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Entry
OCT59_014617 CDS
T10295
Name
(RefSeq) uncharacterized protein
KO
K04646
clathrin heavy chain
Organism
rie Rhizophagus irregularis
Pathway
rie04142
Lysosome
rie04144
Endocytosis
rie05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
rie00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
OCT59_014617
04142 Lysosome
OCT59_014617
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
OCT59_014617
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rie04131
]
OCT59_014617
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rie04147
]
OCT59_014617
Membrane trafficking [BR:
rie04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
OCT59_014617
Exosome [BR:
rie04147
]
Exosomal proteins
Proteins found in most exosomes
OCT59_014617
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
TPR_PEP5_VPS11
Clathrin-link
TPR_IF140-IFT172
TPR_Vps41
TPR_COPA_B
Motif
Other DBs
NCBI-GeneID:
36862578
NCBI-ProteinID:
XP_025190127
LinkDB
All DBs
Position
22:complement(1628082..1635440)
Genome browser
AA seq
1675 aa
AA seq
DB search
MSDNDLPILLEEICQLQELGVNSSSIGFNWLTMESDRFICVRETTGPTNQVVIIDLQDTS
NVLKRPITADNAIMHPSAKILALKAARQLQIFNLELKSKVKSHTMQEDVMFWKWINQKTL
GLVTGTAVYHWSMEGDSAPAKMFDRHANLANSQIINYRVNADERWMVLVGISAVEGRVVG
NMQLYSKDRKVSQPIEGHAAAFANIVLENGVSPTSLFTFAIRSTNGAKLHIVEVDHKDEN
PQFPKKTVDVFFPSEATGDFPVSMQVSKKYNIIFLVTKFGYIHLYDLETGICIYMNRISG
ETIFVTAERENGSGIVGVNRKGQVLSVCVDESQIIPYIISINNSDLALRIASRCNLLGAE
KLYMDKFMQLLQQGAYNEAAKVAANSPQGFLRTPQTIERFKNVSVPAGGLSPILQYFGIL
LEKGELNKHESLELARPVLAQNRKQLLEKWLKEDKLECSEELGDIVRQHDLTLALSVYLR
ANVPNKVIACFAETGQYSKIVLYAKKVGFQPDYPILLQQIMSRDPEKGAEFATMLVNDEN
GSLIDIEKVVDVFMSNNKIQQATAFLLDALKDNKPEHGHLQTRLLEMNLLNFPQVADAIL
SNAILSHYDKPYIASLCEKAGLLQRALEHYTEINDIKRVIIHTGAMNAEFVVNYFGTLSV
DQSLECLKEMLKNNRQTLQVVVQIATKYSEQLQPINLINLFESFKTYEGLYYYLGSIVNL
STDPDVHFKYIQSAVKTGQIKEAERICRESNYYDPEKVKNFLKEAKLSDQLPLIIVCDRF
DFVHDLVLYLYQQNLTKYIEVYVQKVNPARTPVVIGGLLDVDCDESIIKGLLMSVTGSLP
VDQLVEEVEKRNRLKLILPWLELRVQENSQDPAVYNALAKIYIDSNNNPEAFLRENTYYD
SLTIGKYCEKRDPNLAFIAYQRGQCDKELVKITNENSMFKHQARYLVKRRDSNLWAFVLD
ENNMYRRSLIDQINAVALPESIDPDDVSFTVKAFMNADLPIELIELLEKLILENTAFSDH
KVLQNLLILTAIKADKAKVMDYINRLNNFDAPDVADLAIKNNLFEEAFTIYKKCKDDKNA
MNVLIEHIGSIDRAADYANVCDQPEVWSRLAKAQIEGLRIKDSIDSYIRADDPTNFSEVI
DISARAGKYDDLVRYLQMCRKKLREPQVDSKLLFAFAKTERFHDIEEFLNTPNVAQIQVV
GDGCYDEGLFEAAKILFMSVSNWARLASTLVHLGEYQSAVDCARKASSTKVWKDVHNACV
QHKEFRLAYICGLNLIVHADELQEVIRQYEYNGYIDELLQLLEAGLGLERAHMGMFTELA
ILYTKYKPEKTDEHLRLFWSRLNIPKVIRACDEAHLWKEMVFLYENYDEFDNAALSMITH
ASDAWEHSRFKDIVVKVSNLEIYYKALKFYLDEHPLLLSDLLVALTPRIDHTRVVQMFKK
SDNLPLIKSYLISVQETNNLAVNNAYNDILIEEEDYKSLRDSIDNFDKFDNIELAQRLEK
HDLLEFRRIAAHLYKKNKRWAQSIALSKEDRLFKDAIETASESRSTEVAEELLEYFVQIG
NKECFTACLYACYDLVRSDVVLEMSWKHGLTDFAMPYLVQVMREFSNKIDILEKANAERT
AKEQEREKNESEIPLINPAGLGNQLLLTQGPGQGMAPQGYGNAYGNINNMNYQGF
NT seq
5028 nt
NT seq
+upstream
nt +downstream
nt
atgtctgataacgatcttccaatactgttagaggagatatgtcagctccaggaactcggt
gtaaattcaagcagcataggttttaactggctgaccatggagtctgaccgttttatctgt
gtgcgtgaaaccactgggccgaccaaccaagtcgtaataattgatcttcaagatacttcg
aatgttcttaaaagaccaatcactgctgataatgcaataatgcatccttcagctaaaatt
cttgcgttaaaagccgcaagacaattgcaaatattcaaccttgagttgaaatcaaaagta
aaatcacataccatgcaagaagatgtaatgttttggaaatggatcaatcaaaagactctt
ggacttgtcacaggaacagcagtatatcattggtcaatggaaggcgattcagctccggct
aagatgtttgataggcatgcgaatcttgcaaattctcaaattatcaattatcgagttaat
gcagatgaaaggtggatggttctagtgggaatatctgctgtggaaggtagagtggtcggg
aacatgcaattatattctaaagatcgtaaagtcagtcagccaattgaaggacacgctgca
gcatttgcaaatattgtactggaaaacggagtttcacccacaagtttatttacttttgct
ataagaagtacaaatggtgcaaagttacatattgttgaagtcgatcataaagatgaaaat
cctcaatttccgaagaagaccgtggatgtatttttcccatcagaggctactggagatttc
cctgtctccatgcaagttagcaaaaaatataatataatttttctcgtaacgaagtttgga
tatattcatctttacgatctagagacaggtatatgtatatatatgaatagaattagtggc
gaaacaatttttgtaactgctgaacgtgagaatggtagtgggatagttggagttaataga
aaaggacaggtgctatcggtttgtgtggacgaatcacaaatcattccttatattatatcg
ataaataattcagacttagcactaagaatcgcttcaagatgtaatttgcttggtgctgaa
aaattatatatggataaatttatgcaattattacagcaaggagcgtataatgaagctgcc
aaagttgcagcaaattcccctcaaggtttccttcgcacaccacaaacaattgaacgattt
aaaaacgtttccgtgccagcgggaggattatcccctattttgcaatatttcggaattctc
ttggaaaaaggagaattaaacaaacatgagtctttggaacttgcaagacctgtgttagct
caaaatcgtaagcaactattggaaaagtggttaaaagaagacaagttggaatgtagtgag
gaattaggtgatatagttcgtcaacatgatttaacattggccctgtcagtttaccttcgt
gccaatgttccgaataaggtaatcgcctgttttgctgagacaggtcaatactcaaagatt
gttctatacgcaaaaaaagtaggatttcaaccagattatcccatattgcttcaacaaatt
atgtctagagatcctgaaaagggagcagagttcgccactatgttggtgaatgatgaaaat
ggatcattaattgatattgaaaaagttgttgatgtattcatgtccaacaataaaattcaa
caagctactgcgttcttattggatgcattaaaagataataaacctgaacatggacattta
caaaccaggttgttagagatgaatttgcttaacttcccacaagttgctgatgcaattctt
agcaatgcaattctcagtcattatgataaaccttatatcgcgtctctatgtgagaaagct
ggtttattacaaagggcactggaacattatacggaaattaatgacataaagcgtgtaatc
atacatacgggtgctatgaacgctgaatttgttgtcaattactttggtactttatcggtc
gatcaatccctcgaatgcttgaaagaaatgttaaagaataacaggcagactttacaagtg
gtagttcaaattgcgacaaaatattccgaacagttacaaccaataaatttgattaatttg
ttcgaatcctttaaaacttacgaaggattatattattaccttgggtcgattgtcaatctt
agtacggatccggatgtacatttcaaatatattcagtctgctgtaaagaccggtcaaatt
aaagaggctgaaaggatatgccgagaaagtaattattatgatccggaaaaagttaaaaac
tttttaaaggaagctaaactctcagaccagcttcccttaattattgtctgtgatcgattt
gattttgttcatgacttggtactttatctttaccaacaaaatctgacaaaatatatcgaa
gtgtatgttcagaaagtcaatcctgctcgtactcctgttgttattggtggtctcctagat
gtcgattgcgatgagtcgattatcaaaggtctacttatgtctgttactggttctcttcct
gttgatcaattggttgaagaagttgaaaagcgcaatcggcttaaattaattttaccttgg
ttggaattacgtgtacaagagaatagtcaagatccagccgtctataatgcacttgccaag
atatatattgacagcaataacaaccctgaagctttccttagggaaaatacttattacgat
tcactcactattggtaaatattgtgaaaagagagaccctaatcttgcttttatagcgtat
caacgcggtcaatgcgataaagaacttgttaaaatcaccaatgagaactcaatgtttaaa
catcaagctcgatatttggtaaaacgacgtgactctaatttatgggcgtttgttttggat
gagaataacatgtaccgcagatctttaattgaccaaattaatgctgtagctttacccgag
tctattgatccagatgatgtttcttttactgtcaaagcgttcatgaatgccgatttgcca
attgaattaattgaacttttagagaaactgatcttagaaaacacggctttcagtgatcat
aaagttctccaaaatttgcttatcctcacagccattaaggctgacaaagctaaagtgatg
gattatatcaacaggcttaacaactttgatgctcctgatgtcgctgatctcgctattaaa
aacaatttgtttgaagaagcgttcaccatttacaaaaaatgtaaagatgataaaaacgca
atgaatgtattaattgaacatattggaagtatagaccgagctgctgattatgcaaatgtt
tgtgatcagccagaagtatggagtcgtttagcgaaagcacagattgaaggtctaagaatt
aaagattcaattgattcatatattcgcgccgatgatccaaccaattttagtgaagtaatt
gatatctcagcacgtgctggaaaatacgatgaccttgttcgatatttacaaatgtgccgc
aagaaacttcgcgaacctcaagttgacagcaaattattatttgcttttgcaaagacagaa
cgatttcatgatatagaagaatttcttaacacgcctaatgtagctcaaatacaagtagtt
ggagacgggtgttacgatgaaggtttatttgaagctgcaaagatcctgtttatgagcgtc
tcaaattgggcaagactggcttctacacttgttcatctaggagaatatcaatctgctgtc
gattgtgcaagaaaagctagcagtacaaaagtttggaaagatgtacataacgcctgcgta
caacacaaggaattccgcttagcttatatatgtggtcttaatcttattgttcatgctgat
gagttacaggaagttattcgccaatacgaatacaacggttatatagacgaattattacag
cttcttgaagctggccttggtcttgaaagagcacacatgggaatgtttactgaactagca
attctatacacgaaatataaaccagagaaaacagacgagcatctacgcctattttggtct
cgtcttaacattccaaaagtcatccgagcttgtgatgaagcgcatttatggaaagagatg
gtattcttatatgagaattatgatgaatttgataatgctgctctttcaatgattacacat
gctagcgatgcatgggaacactcacgttttaaggatattgttgtcaaagtcagcaacctc
gaaatatattataaggcattgaaattttatttggatgagcatcccctcttattaagtgat
ttattagtcgctcttactccaagaattgatcacactagagttgttcaaatgttcaagaaa
tccgataacttaccattgatcaaatcatatttgatatctgttcaagagacaaataattta
gcggttaacaatgcttataatgatatattaattgaggaagaagattataaatcactacga
gactcaattgataactttgataaattcgataatattgagttagctcaaagacttgaaaag
catgatctcttagaattccgtcgcattgcagcgcatctttacaagaaaaacaaacgatgg
gcacaatctattgctttatctaaggaggatagactttttaaagatgctattgaaacagcc
agcgaatcacgttccaccgaagttgcagaagagcttttagagtattttgtacagattgga
aacaaagaatgtttcacagcgtgtttgtacgcatgctatgatttagttagatcggatgtt
gtattggagatgtcttggaagcatggtcttaccgactttgccatgccatacttggttcaa
gtcatgcgagaattcagcaacaagatcgatattttggagaaagctaacgcagaaagaaca
gctaaagaacaggaacgtgaaaagaatgaaagtgaaataccactcataaatccagccgga
ttaggaaatcaacttctacttacacaagggccaggacaaggaatggcacctcaggggtat
ggcaatgcttacggtaacataaataatatgaactatcaaggtttttaa
DBGET
integrated database retrieval system