Rhizophagus irregularis: OCT59_015090
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Entry
OCT59_015090 CDS
T10295
Name
(RefSeq) ubiquitin-40S ribosomal protein S27a
KO
K02977
ubiquitin-small subunit ribosomal protein S27Ae
Organism
rie Rhizophagus irregularis
Pathway
rie03010
Ribosome
rie04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
rie00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
OCT59_015090
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
OCT59_015090
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
rie03011
]
OCT59_015090
04121 Ubiquitin system [BR:
rie04121
]
OCT59_015090
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rie04147
]
OCT59_015090
Ribosome [BR:
rie03011
]
Ribosomal proteins
Eukaryotes
Small subunit
OCT59_015090
Archaea
OCT59_015090
Ubiquitin system [BR:
rie04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
OCT59_015090
Exosome [BR:
rie04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
OCT59_015090
Exosomal proteins of colorectal cancer cells
OCT59_015090
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ubiquitin
Ribosomal_S27
Rad60-SLD
Ubiquitin_2
Rad60-SLD_2
DUF2604
Dsc3_N
TBK1_ULD
IBR
Ubiquitin_5
UBL_UBAC1
Motif
Other DBs
NCBI-GeneID:
36872216
NCBI-ProteinID:
XP_025167608
LinkDB
All DBs
Position
23:499602..500792
Genome browser
AA seq
157 aa
AA seq
DB search
MQIFVKTLTGKTITLEVESSDTIDAVKTKIQDKEGIPPDQQRLIFAGKQLEDNRTLSDYN
IQKESTLHLVLRLRGGGKKRKKKTYTTPKKIKHKRKKVKLAVLKYYKVDDNGKISRLRRE
CPTATCGAGIFMAWHYDRQYCGKCGLTYVFKKEETES
NT seq
474 nt
NT seq
+upstream
nt +downstream
nt
atgcagattttcgtgaaaactttgacgggtaagactatcacccttgaggttgagtcatcc
gacactattgatgctgtcaagaccaagatacaagataaagagggaatccctcctgatcaa
cagcgtttgatctttgccggaaagcagctcgaggataatcgtactctttctgattataat
atccaaaaagaatcaaccttacatttagttcttcgtttgagaggtggtggtaagaaacgt
aagaagaaaacctacaccacgccaaaaaagatcaagcacaagagaaagaaagtcaaatta
gcagtactcaaatattacaaggttgacgataatggcaagatttcgcgacttcgcagagaa
tgcccaactgccacatgcggtgctggcatttttatggcatggcattatgaccgtcaatat
tgtggaaagtgtggcttaacttatgtatttaagaaagaagaaactgaatcttaa
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