Rhizophagus irregularis: OCT59_015132
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Entry
OCT59_015132 CDS
T10295
Name
(RefSeq) uncharacterized protein
KO
K19842
RHO1 GDP-GTP exchange protein 1/2
Organism
rie Rhizophagus irregularis
Pathway
rie04011
MAPK signaling pathway - yeast
Brite
KEGG Orthology (KO) [BR:
rie00001
]
09130 Environmental Information Processing
09132 Signal transduction
04011 MAPK signaling pathway - yeast
OCT59_015132
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CNH
RhoGEF
PH_5
DEP
SOS1_NGEF_PH
PH
PH_13
Motif
Other DBs
NCBI-GeneID:
36860000
NCBI-ProteinID:
XP_066002638
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Position
23:complement(692497..698260)
Genome browser
AA seq
1262 aa
AA seq
DB search
MQNMVSYEPKKNGTRPYSGNPSQEGLYKGAKQHYDSYAAYRTPPTERPRGPRSSNEATAR
LWEDGYPRNSNSSNNIVVGQNTSVGDNFDLESRSETYPYIHDQQHNTVYSDSAYLPHYSQ
PASQYPYQQYQTSGSNIYQNPAAASAPSLGTLSSEEESDIFSSTQQYPHYSQHLEYPQHT
YPQSLQFSQHTHYQFNGYPYQHQAEYQHPLYTQTSHTGPPPQIAVQTVHPYEGRSQSLTS
RSFSKSGRRSPQPLSQYASNIAQSSTSTRSMSINGAVSNLIIPSYADENIPPRRSMESVR
ERSKPPLTNHRTERFRSFSYSDASPSSVTSEVSSSPSSPSSTIGKQHIPIVYPALLSRVA
DAFRARVTLSNRMKDNLEYKDCFDGREAVDKIAFIIKTTDRNLALLLGRALDSQKFFHDV
TYDHRLRDSPNELYQFQKMPSILSSSENYELEDDVEEEEIEENDLPNGVFTLLTDCYSPT
CTRDNLCYSIACPRRLEQHARKNMKPNPGLKRAVSRGSISDKKDQKLWIHTVPPEIANTV
SETEKKRQEAINEVIYTEKDFVRDLEYLRDCWMNPLLNQNFIPESRRKNFVNEVFYNILE
VHNVNSKLADALQKRQNSFAIVEQIGDIFLEYAPLFDPFIKYGAHQLWGKYEFEREKNSN
HVFAKFVEETERRPESRKLELNGYLTKPTTRLGRYPLLLEAVLKQTPQEHPDRINLPKVI
KIIKEFLTNVNVESGKSENRFNLQQLNDQLIPKGEHDLGLTEEGRQLIFKGSLKKRGGGG
ESSDLQVFLFDHALLMVKVKTVNKVEQYKIHRKPIPLVLLSVSATEGQSEGNKRPPSILP
GKNPTVVRGNGDKQYALTFGRLGKQSFTVTLYATTFISRRKWIEHIEKQKEIINDKSKVF
ERGISLEKLSTGPNKVNCGSYFDGYSKLVFGTDLGIYVLEIGSSSKAVRVIQLERVSQID
VLEEFRLLLVLADKCFYSYPLESLDPIKSKEAIKRSSKISSHASFFKSGTCLGKTLVTVV
KNSALNSTIKTLEPIEQNIKNKNKSPLKILSGRSSDSLKTYKEFYIPTELTSVNFLSKKL
CVGCCAKGFEIVDLETLITQSLIDPDDVSLDFVQKKENVKPIAIYRISGGDFLLCYDEFA
FYVNKVGWRSRSNWLITWEGSPTSFALRYPYVLAFEPSFIEVRHVETGILEQIIEGHNMR
CLYSDSRGNILVVTTDQATDSSEVFSLKLVDGRRSSLISEATSISTSVLGYEDGNTRPDN
GS
NT seq
3789 nt
NT seq
+upstream
nt +downstream
nt
atgcagaatatggtttcttacgaacctaaaaaaaatggtactcgtccatatagtggcaat
ccttcacaagaagggctgtataaaggtgctaaacagcattatgatagttatgctgcgtat
aggacgcctcctacagaaaggccgagaggaccgagatcctctaatgaagcgactgcacgg
ctgtgggaagatgggtatccgagaaattctaattcgtcaaataatatagttgtcggtcag
aatacttcagtgggggataatttcgatcttgaatcacgttcagagacttatccttacata
catgaccaacaacataatactgtctatagtgactcggcctatcttccgcattattcccag
ccagcttcacaatatccatatcaacaatatcaaacatccggttcaaatatatatcaaaat
ccagctgctgcaagtgcaccttcattgggaacattgtcatctgaagaggagtcagacatc
ttttcttcaacgcagcagtatccacactattcacagcatttagaatatccccaacacaca
tatccacaatcattacaattttcgcaacacacacattaccaatttaatggatatccatat
cagcatcaagctgaatatcagcatccgctttatacacaaacctcacatacaggaccacct
ccacaaatcgctgttcagacagttcatccttatgaaggacgttcacaatcgttgacttca
cggtcatttagtaagtctggacgtagatctccacaaccactttctcaatatgcatcaaac
attgcacagagttcaacctcaacaaggtcaatgtcgattaatggtgccgtctcaaatctt
attattccatcatatgctgatgagaatattcccccaagaaggtccatggaaagtgtacgt
gagagatcaaaaccgccgctgacaaatcatcgtaccgaaagatttcggtcgttttcatat
tctgacgcatcaccatcgtcagttacttcagaagtatctagttctccgtcttcaccttct
tctacaataggaaaacaacacataccaattgtatatccagctttgctttcacgagttgca
gacgcatttcgtgcgcgagttactttatcaaataggatgaaggataatctcgagtataaa
gattgttttgacggaagagaggctgtggataagattgcgtttatcatcaaaacaacggat
agaaatttggcacttttacttggtcgagctttggattctcaaaagtttttccatgatgtc
acatacgatcatagacttcgcgattctccaaacgagttatatcaatttcaaaaaatgcct
tcaatattgtcatcatctgagaattatgagcttgaagacgacgttgaagaagaagaaata
gaagaaaacgatttaccaaatggcgtatttactttattgactgattgctattcacctaca
tgtactcgggataacttatgttatagcattgcttgcccacggagattagaacaacatgca
agaaaaaatatgaagcccaatccaggattgaaaagagctgtgagccgtggatctatctct
gataaaaaggatcagaaattgtggattcatacggtaccacctgagattgctaatacagtt
tcagaaacagagaaaaaacgccaagaagccataaatgaagtaatatatacagaaaaggat
tttgttcgcgatttggaatatctgagagactgttggatgaatcctctcttaaatcaaaat
ttcatacctgaatcccggcgaaaaaattttgttaatgaagttttttataacatattggaa
gtccataacgttaattctaaattggctgatgctttacaaaaacgtcaaaattcatttgct
attgtagagcaaattggggatatatttttagaatatgctcctttgtttgatccgttcata
aaatacggtgctcatcaattatggggcaagtatgaatttgagagagaaaaaaatagcaac
catgttttcgcaaaattcgtggaggaaactgaacgtcgacctgaatctaggaaactcgag
cttaatggatatctaacaaagccaacaacacggcttggtcgttatccattacttttggag
gctgttctcaaacaaacccctcaagaacatcctgaccgtattaatttacccaaagttatt
aagattattaaagaattcctaacaaatgttaatgtcgaatctggaaaatccgaaaatcga
tttaatctgcagcaactaaacgatcaattgattccaaaaggagaacatgatcttggatta
acggaggaggggcgtcaattaattttcaaaggttctttgaagaagcgaggtggtggcggg
gaatcttctgacttgcaggtgtttttatttgatcatgctttactaatggtgaaggttaaa
accgtgaataaagttgagcaatataagattcatcggaagccaatacctcttgtgctttta
agcgtatctgcgacagaaggtcaatctgagggaaataaacgcccaccatctattttacct
ggaaaaaatccaacagtagtgcgtggaaatggcgacaagcaatatgcacttacatttggt
cgtcttggaaagcaatcatttactgtaacattatatgctaccacatttatcagccgcaga
aaatggattgaacatattgaaaaacagaaagaaataattaacgataagagtaaagttttc
gaaagaggaatctcgttagagaaactgagtactggtccgaataaagttaattgtggatcc
tattttgacggctacagtaagttagttttcggaacagatctcggaatatatgtattggaa
attggctcaagttcaaaagctgttcgtgtaattcaattagaaagagtatctcagatagat
gtccttgaagaatttcggttgttgttagtgttagcagataaatgtttttattcatatcca
cttgaatcattggatcctattaaatcaaaagaagccattaaacggtcaagcaaaattagt
tcacacgccagtttttttaagtctggaacttgccttggaaagactttggtgaccgtagta
aaaaatagtgcccttaattcaactattaaaacactcgaacctattgagcaaaacataaaa
aacaaaaataaaagcccacttaagattttgagtggaagaagtagcgattcattaaaaaca
tataaggaattctacataccaacggaattaacgtcggtaaatttccttagtaaaaaatta
tgtgtgggatgttgtgcaaaagggtttgagattgttgatttagaaacacttattacgcaa
agtttaattgatccggatgatgtttcgctcgattttgttcaaaagaaagaaaatgttaag
ccaattgctatataccgaatttcagggggagactttttattatgttatgatgaattcgct
ttctatgttaataaggttggatggcgttcacgttcaaattggttaataacgtgggaagga
tctcccacttcttttgctctccgttatccttatgtacttgcatttgaaccatcttttatt
gaagtacgtcatgttgagactggaattcttgagcagattattgaaggacacaacatgcgt
tgtttatattctgattcacgtggcaatattttagttgttacaacggatcaagcaacagac
agttctgaagttttttcattaaaacttgttgatggcagaaggagttctttaatttctgag
gctacaagtatatccacaagtgttttaggatatgaggatggtaacacaaggcctgataat
ggtagttga
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