Rhizophagus irregularis: OCT59_015416
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Entry
OCT59_015416 CDS
T10295
Name
(RefSeq) uncharacterized protein
KO
K28527
splicing factor YJU2
Organism
rie Rhizophagus irregularis
Pathway
rie03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rie00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
OCT59_015416
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rie03041
]
OCT59_015416
Spliceosome [BR:
rie03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
OCT59_015416
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Saf4_Yju2
Zn_ribbon_LysW
Motif
Other DBs
NCBI-GeneID:
36881332
NCBI-ProteinID:
XP_025189124
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All DBs
Position
23:complement(2004646..2005765)
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AA seq
323 aa
AA seq
DB search
MSERKVLNKYFPPDFDPAAIPRRKQAKDAQHKVRLMTPYAMRCDTCGEYIYKGKKFNARK
ETVEGETYYSIKIFRFYIKCPRCSAEITFKTDPKNTDYVAEHGAQRNFEPWREERLAGEE
SKLLKELEEENNPMKALENRTIDSKIEMDVLDALDEIRTRNARNERVDADALLDKLVDQD
IVKEKSQEELLEEEDSKLAKAIFHNVDGDSVKRIADDDEPDLKQLLSDSAKSLLLPKFSS
NAKNDEEGSLAKRKQKRPGSELGVVVKKRKQASTTSSPIKVESSNLSNTTSTTINIDPNS
SNKISNSLGALLGAYGSDSDNDD
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaacgtaaagttttaaataaatattttcctccagattttgatccagctgctatc
ccgaggagaaaacaagctaaagatgctcagcataaggttcgactcatgacaccgtacgct
atgagatgtgatacgtgtggagaatatatatataaaggaaaaaaatttaatgcgcgtaaa
gaaactgtagaaggggaaacctattattccataaaaatattcagattttatataaaatgt
ccaagatgttcagcggaaattacatttaagactgatccaaagaatacagattacgtagca
gagcatggagcacaacgtaattttgaaccatggagggaagagagattagcaggagaagaa
agtaaattattaaaagaattggaggaagaaaataacccaatgaaagctttagaaaatcgt
actattgattcaaaaatagaaatggatgttttggacgcattagatgaaattagaacaaga
aatgcgagaaacgaaagagttgatgctgatgctttattagacaaattagttgatcaagat
atcgttaaagaaaaatctcaagaagaattattagaagaagaggatagtaaattagctaaa
gctatatttcataatgttgatggtgattctgtcaaaagaattgccgatgacgatgaacca
gatttaaagcaattgctctctgattctgcaaagtctttacttttaccaaaattttcttct
aatgctaaaaatgatgaggaaggatcgttagccaaacgaaaacaaaaacgtcccggatct
gaacttggagtagttgttaagaaaaggaagcaggcttctacaacatcatcacccataaaa
gttgaatcttcaaatttgtctaataccactagtaccactataaacattgatcctaattca
tcaaataagatttctaattcactaggtgctttattaggtgcatatggatcggattctgat
aatgatgattaa
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