Rhizophagus irregularis: OCT59_016747
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Entry
OCT59_016747 CDS
T10295
Name
(RefSeq) uncharacterized protein
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
rie Rhizophagus irregularis
Pathway
rie03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rie00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
OCT59_016747
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rie03400
]
OCT59_016747
Enzymes [BR:
rie01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
OCT59_016747
DNA repair and recombination proteins [BR:
rie03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
OCT59_016747
Prokaryotic type
OCT59_016747
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-GeneID:
36872062
NCBI-ProteinID:
XP_025167993
LinkDB
All DBs
Position
25:1225873..1227199
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AA seq
288 aa
AA seq
DB search
MLKRKITSTFNNNKKQKATTLTQSSLSSWVNPQPQTLSTINSETLFNKIGNENKELLSLE
IKTMNSEWLKVLSGEMQKPYFIELKKYLQNEKANNKKIFPPEPEIYSWSRFTPPSSVKVV
IIGQDPYHNVGQAHGLCFSVPHGVPPPPSLINIYNSLKKDIPSFQIPKHGNLINWAKAGV
LLLNTSLTVRAHEAASHSGKGWEKFTDAVIQYLNEKENGLVFMLWGNHAIKKGKNINENK
HLVLQTVHPSPLSAHRGFLVCCHWSKANAYLKSHGKQEIEWNCLSAAD
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgctcaaacgtaaaataacctctacttttaacaataataaaaaacaaaaagcaaccact
ttaacacaaagttctctttcttcttgggtcaaccctcagccacaaacccttagtactatt
aattcagaaaccttattcaataaaataggaaatgaaaataaagaattgttgagcttggaa
attaagactatgaatagcgagtggctgaaagttttaagcggcgaaatgcagaaaccctac
tttatagagctaaagaaataccttcagaatgagaaagctaataataagaaaatttttcca
cctgaaccggaaatatatagctggtcaagatttaccccaccatcttcagtcaaagttgtc
attataggacaagatccttatcacaatgtcggtcaggctcatggcttgtgttttagtgtt
ccacatggcgtcccaccaccaccatcgttgatcaatatatataactccttgaaaaaggat
attccgtcatttcagattccgaaacacggtaatcttatcaattgggccaaggctggagtc
ctccttttaaatacctctctcactgtacgagcccatgaggcagcaagtcatagtggaaaa
ggatgggagaaatttactgatgctgtgatacaatatttaaacgagaaagagaatggatta
gttttcatgttatggggaaatcatgctattaaaaaaggaaaaaatattaacgagaacaaa
catctcgttctgcaaacagtccatccgtcaccattgtctgcccatcgtggatttttggtg
tgttgtcattggtctaaagccaatgcatacttgaaatctcacggcaaacaagaaatagaa
tggaattgtttgtcagcagctgattaa
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