Rhizophagus irregularis: OCT59_018203
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Entry
OCT59_018203 CDS
T10295
Name
(RefSeq) uncharacterized protein
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
rie Rhizophagus irregularis
Pathway
rie03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
rie00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
OCT59_018203
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rie03019
]
OCT59_018203
Enzymes [BR:
rie01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
OCT59_018203
Messenger RNA biogenesis [BR:
rie03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
OCT59_018203
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
PAP_RNA-bind
NTP_transf_2
MTPAP-like_central
Nrap_D2
Motif
Other DBs
NCBI-GeneID:
36871090
NCBI-ProteinID:
XP_066004514
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All DBs
Position
27:complement(1320179..>1323800)
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AA seq
582 aa
AA seq
DB search
MSDLPNGPKHLGVTPPIALNYPTQREIEVTDLLVQELTAQGTFESEDESRRREVVLGKLD
KLVKEFVYRTSKKRQLPDADAREAGGKIFTFGSYRLGVHGAGADIDTLCVVPRHVAREDF
FSDMHDSLNSLNEVTELTSVTDAYVPVIKMKFQDIPIDLVFAKLNVPKVPDDLELRENLL
LKNLDETCIRSLNGSRVTDEILRLVPSIPAFRTSLRCIKLWAHRRAIYSNVMGFFGGVAW
AMLVARICQLYPNAIAGAIVSRFFRIMYQWNWPQPVLLKPIEDGPLQVRVWNPKIYHGDR
YHLMPIITPAYPSMCATHNVTQSTKKIIEEEFKRAAEIADKVMIGTGKWSDLFSKHDFFS
RYRHYLQIITSSDSATRQLKWSGMVESRIRHLISKLEGVDNLYLAHPFVKGEKSGTDSSK
SGNENGSNTIYTTTFYIGLLVEPRAVGSTTAHRQLNLSWPISEFTKLVKSWDKFDERYMN
ITVKNVKCTQLPQEVFEEGEQRPTKLKRTKPGGKAKSNTTTTEQPIKKRKTDKVTDKVDT
ATDQPNKKRKTDKVIDKDDMTTTEQKRKSDKVEINGSNLESN
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgtctgatctaccaaatggtccgaaacaccttggtgttactccaccaattgctttaaac
tatccaactcagagagaaattgaggttacagatttattagtacaagagcttaccgcacaa
ggaacttttgaaagtgaagatgaaagtcgtcgtcgagaagttgtacttggaaagcttgac
aaattagttaaagaatttgtttatcgaacaagtaaaaagagacagttgcctgacgctgat
gcaagggaagctggcgggaaaatatttacttttggttcttacagattgggtgttcacggt
gcaggtgcggatattgatacgttatgtgtagttccaagacatgttgctcgggaagacttt
tttagtgacatgcatgattcacttaattctctgaatgaagttacggaattaactagtgtt
actgatgcatatgtaccagtaatcaagatgaaatttcaagatattcctatagatcttgtt
tttgcaaaattgaatgttcctaaagttcctgatgatcttgagcttagagagaatttgctt
ttaaaaaatttggatgagacatgcataagaagtcttaacgggtcgcgtgtgacggatgaa
atactacgtctggtgcccagtatacccgcttttagaacgtcactgcggtgcatcaaactg
tgggcacatagacgtgcgatttattcaaacgtaatgggcttttttggtggggttgcttgg
gcaatgctagtagcaagaatttgtcaattatatccgaatgcgattgcaggtgcaatcgtt
tcccgatttttcagaattatgtatcaatggaattggccacaaccggtattactaaaaccg
atcgaggatggtcctcttcaagttagagtttggaatccgaagatatatcacggagataga
tatcatctcatgcctattatcactcctgcatatccttcgatgtgcgcaacacataatgtg
actcaatctaccaaaaaaataatcgaagaagaattcaaacgagcggctgaaatagcagat
aaagttatgattggaactggcaaatggtcagatctcttttctaaacatgattttttttcc
agatatcgacattatcttcaaattataacatcatccgattccgcgacgagacaattgaaa
tggtctggaatggtcgaatcgaggattcgtcatttgatatcaaaactggaaggcgtggat
aacttatatttagcgcatccatttgtaaagggtgagaaaagcggtacggattcttcgaaa
agtgggaatgaaaatggtagcaacacaatttataccacaactttttatatcggattgctt
gttgaaccacgtgcagttggatcaactacagcacatcgacagctaaatctttcatggcct
atatcagaatttactaaattggttaaaagttgggataaatttgacgaaagatacatgaat
ataacagtgaagaatgtaaaatgtactcagctacctcaggaagtgttcgaagaaggcgaa
caaagacctacgaagctcaagcgtacaaaacccggtgggaaggccaaatcaaacacgaca
acaacagaacaacccataaagaagcgaaaaacggataaagttacagataaagtggacaca
gcgacagatcagcctaataagaagcgaaaaacggacaaagttatagataaagatgacatg
acgacgacagaacagaagcgaaaatcggataaagtggaaattaatggttccaatttggag
tcaaattaa
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