Rhizophagus irregularis: OCT59_018381 Help Entry OCT59_018381      CDS       T10295                                  Name (RefSeq) uncharacterized protein   KO K03010   DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6] Organism rie  Rhizophagus irregularis Pathway rie03020   RNA polymerase rie03420   Nucleotide excision repair Brite KEGG Orthology (KO) [BR:rie00001]  09120 Genetic Information Processing   09121 Transcription    03020 RNA polymerase     OCT59_018381   09124 Replication and repair    03420 Nucleotide excision repair     OCT59_018381  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:rie03021]     OCT59_018381    03400 DNA repair and recombination proteins [BR:rie03400]     OCT59_018381 Enzymes [BR:rie01000]  2. Transferases   2.7  Transferring phosphorus-containing groups    2.7.7  Nucleotidyltransferases     2.7.7.6  DNA-directed RNA polymerase      OCT59_018381 Transcription machinery [BR:rie03021]  Eukaryotic type   RNA polymerase II system    RNA polymerase II     Core subunits      OCT59_018381 DNA repair and recombination proteins [BR:rie03400]  Eukaryotic type   SSBR (single strand breaks repair)    NER (nucleotide excision repair)     TCR (transcription coupled repair) factors      DNA-directed RNA polymerase II complex       OCT59_018381 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_7 RNA_pol_Rpb2_2 RNA_pol_Rpb2_3 RNA_pol_Rpb2_5 RNA_pol_Rpb2_4 C1_2 Motif Other DBs NCBI-GeneID:  36859590 NCBI-ProteinID:  XP_025178485 LinkDB All DBs Position 27:complement(2293931..2299353) Genome browser AA seq 1268 aa AA seqDB search MDYIDYMLNHSTFTNQDSQDSLDSLDSQTILNDKLFEYQYDDLLFVNNEDACSDVYSGYQ TDESMATEYGSAFEDDDDKIDLTQEECWEVISSFFKNKGIIRQQLDSFDDFIERGLVEVI TESPIQVIRNSDIEDEQETITQYRFEFDNPSFTKPQFTESEGVKTQLFPNEARLRGLTYS APLILDVKLFVSKLTVNNFNYNDIDFKESEEILIDERAFLGKIPVMVHSNFCSLADLTFE ELKDHHECPYDQGGYFVVNGSEKVLIAQERLANNYAYVFKHALPAISYSVEFRSTNAHMS KIRTVNLKLVTKTSAGEKSGQYIHVNLPFIKKDIPIKVLFVALGILNDEEVIDYMCFDSN DNEMFNIILSCIEESCTIRSQNLALDYIGRRGTVANAAREKRIEYAKNIIHTEFLPHIGE GIGFNSNKGIFLGYLAHRLLYSALGYREIDDRDHFGKKRLDMAGPLMTSLFSILYKKMVN EMIMYLRKCILSNRVFKLPLAIKSDHITNGFKYSVGTGNWGDSKKAMQSRSGVSQVLNRF TYVSTISHLRRCNAPLGRDAKITKPRQLHNTQWGYICPAETPEGQACGLMKNLALMSYVS VSMPPDSLNEYINNSGICKKINETTFDNIAKLTKVFVNGNLSCITDEPLDLIRLIRDNKG NSLPADIGIVNDVHVNEIRFYCDSGRMCRPLFVVNDQHLALTSYDLFKLKSEIEQDKKYN LWEELVANHYIENIDAEEEETTMICMSPSELYESRLYNLRKLGGLRPRKKRRSVHERLIN LPTCPNKWTHCEIHPSMILGVSASLIPFPDHNQSPRNTYQSAMGKQAMGVYTTNYQLRMD VLANVLYYPQKPLVTTKVMKYLQFRELPAGINAIVAIMCYGGYNQEDSLIINQSSVDRGL FRSFVYRSYVDYEKKKGILNMEEIMKPNSYTTVGLKRGSYEKLDNDGIVPCGIRVTGNDI LIGKVTTLSSEVEMLGQRKESHIYRDVSTPLRSTENGIIDQVIVTTNQDGVKMVKVKVRN TRIPEIGDKFASRHGQKGTIGITYHQEDMPFAANGITPDIIINPHAIPSRMTIGHLVECL MGKLSGLTGNEGDATAFNEITVESISRNLKSMGFHHRGLEVMYNGHTGRKLVAQIFIGPT YYQRLKHMVQDKIHSRGRGPVNIMTRQPVEGRSREGGLRFGEMERDCMISHGAALFLKER LNDVADAYRIHVCDICGLICIAQVSKNVYSCKICKNSTRVSQVHVPYACKLLFQELMSMN ITPRLKLL NT seq 3807 nt NT seq  +upstreamnt  +downstreamnt atggattatattgactatatgttaaaccattctacttttacgaatcaagattcacaagat tcgctagattcactagattcacaaacaattcttaatgataaacttttcgaatatcaatac gatgatctcttgttcgtaaataatgaagatgcatgttcagacgtttattcaggttatcaa actgacgaatctatggcaaccgaatatggttctgcatttgaagatgatgatgataaaatt gatctcacgcaagaggaatgttgggaagttatttcttcatttttcaaaaataagggtatt atccgacaacaattggattcttttgatgattttattgagcgtggtcttgttgaagttata actgaaagtccaatacaagtgataagaaattctgatattgaagatgaacaagaaactatt actcaatatcgtttcgaatttgataatccatcatttactaaacctcaatttaccgaatca gagggtgttaaaacacaattatttccgaatgaagctcgcttaaggggcttaacgtattca gccccacttattttagacgtgaaactttttgtatccaaattaaccgtaaataactttaat tacaatgatattgattttaaagaaagtgaagaaattttgattgatgaaagagcatttttg ggaaagatccccgttatggtacattctaatttttgttctttagctgatttaacttttgag gaattaaaagatcatcacgaatgtccatatgatcagggtggttattttgtcgttaacggt tccgaaaaagttttaatagctcaagaaagactggctaataattatgcttatgtttttaag catgctttaccagctatctcatacagtgtagaatttcgtagtactaatgcgcatatgtca aaaattagaactgttaatttgaaattggttacaaaaacttcagcaggagaaaaatctgga caatatatacatgtcaatttaccttttattaaaaaagatattccaattaaagttttattt gttgctcttggaattcttaatgatgaagaagttattgattacatgtgttttgattctaat gataatgaaatgttcaatattatattatcttgtattgaagaatcatgtacaattcgatca caaaatcttgcgctagattatattggacgcagaggaacagtagctaatgcagctcgtgaa aaacgaattgagtacgcaaaaaatattatccataccgaatttttgcctcatattggagag ggaataggtttcaattcgaataaaggaatttttttaggatatcttgcacatagactttta tattctgctcttggatatcgagaaattgatgatcgagatcattttggcaaaaaacgtctt gatatggccggtcctttgatgacttcattatttagtattttatataagaaaatggtaaat gaaatgattatgtacttaagaaagtgtattttaagtaatcgcgtattcaaattaccttta gcgataaaatcagatcacattactaatgggttcaaatattcagttggtactggtaattgg ggagattccaaaaaagcaatgcagtccagatctggcgtttcacaagttttaaacagattt acttatgtgtcaactatatcacatcttcgaagatgtaatgccccacttggacgtgatgca aagattactaaaccacgtcaacttcataatacacaatggggatatatatgtcctgctgag acccctgaaggacaggcatgcggcttaatgaagaatttagcattgatgtcatatgtctca gtatctatgccacctgattcattaaatgaatacattaataatagtggaatttgcaaaaaa atcaatgaaacaacatttgataatattgctaaattaaccaaagtttttgtcaatggaaat ttatcatgtattacagatgaacctttagatttaatacgattaattcgagacaataaagga aactcccttccagctgatattggaattgttaatgatgtccatgtaaatgaaataagattt tattgtgattcaggaagaatgtgtagaccattattcgtcgtgaacgatcaacatttggcc ttaacttcttatgatttattcaagttaaaatcggaaattgaacaagataaaaagtataat ttatgggaagaattagtagcaaatcattatattgaaaatattgatgctgaagaagaagaa actactatgatatgtatgtctccatcagaattatatgagtcaagattatataatttacgt aaacttggaggtttaagaccaagaaagaaaagaagatcagttcatgaacgtttaattaat ttaccaacttgtccaaataagtggactcattgtgaaattcatccaagtatgattttgggt gtttctgctagtttaattccatttcctgatcataatcagtcacctcgaaatacctatcaa tctgctatgggtaaacaagcaatgggagtctatacgactaattatcaattacgaatggat gtattggccaatgtgttgtattaccctcagaaacctcttgtaaccacaaaagtcatgaaa tatcttcagttcagagaattacccgcaggaatcaatgctattgttgctattatgtgttat ggtggatataatcaagaagattctttgattataaatcaaagtagtgtcgatagaggattg tttagaagctttgtttatagaagttatgttgactatgagaagaaaaagggtattttgaat atggaagaaataatgaaaccaaattcttatacaactgttggattaaagcgtggaagttat gagaaacttgataatgatggaattgtaccttgtggaattagagttactggaaatgatatt cttataggaaaagtaaccacactttcgtcagaagttgaaatgcttggccaacgaaaagag tcacatatatatcgagatgtttctacaccgttgagatctacagaaaatggaattattgac caagtaattgttaccacaaatcaagatggagttaaaatggtaaaggttaaagttagaaac acaagaattccagaaattggagataaattcgcgagtcgtcatggtcagaaaggaacaatt ggaatcacttatcatcaagaagatatgccatttgctgctaatggtattacacctgacatt attataaatccacacgctattcctagtcgtatgacaattggacatttggttgagtgttta atgggcaagctatcgggtttaactggtaacgaaggggatgcaacagcctttaatgaaatt actgtagaatcgatttctcgaaatctcaagtccatgggatttcatcatcgtggattagaa gttatgtataatggtcatactggacgtaaattagttgcacaaattttcatcggaccaaca tattatcaacgtttaaagcatatggttcaagataaaattcactcccgcggaagaggtcca gtgaatataatgactagacaacctgttgaaggacgtagtcgtgaaggaggattaagattt ggtgaaatggaacgagattgtatgatctcacatggtgcagcattattcttaaaggaacga cttaatgatgttgcggatgcttataggattcacgtgtgtgatatttgcggtctaatatgc atagcacaagtttcgaaaaatgtttatagttgtaaaatttgtaaaaattccactcgggtt tctcaagtacatgttccatacgcttgtaaattacttttccaagaacttatgtcgatgaat attaccccaagattaaagcttttataa

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