Rhizophagus irregularis: OCT59_018450
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Entry
OCT59_018450 CDS
T10295
Name
(RefSeq) GTPase-activating protein S23
KO
K14006
protein transport protein SEC23
Organism
rie Rhizophagus irregularis
Pathway
rie04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
rie00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
OCT59_018450
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rie04131
]
OCT59_018450
Membrane trafficking [BR:
rie04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
OCT59_018450
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
zf-Sec23_Sec24
Gelsolin
Vps36-NZF-N
Motif
Other DBs
NCBI-GeneID:
36875105
NCBI-ProteinID:
XP_025184358
LinkDB
All DBs
Position
27:complement(2628808..2632173)
Genome browser
AA seq
760 aa
AA seq
DB search
MNFEEIEEQDGTRFSWNVFPASRLDATRIVVPISCLYTPLREREDLPPIYYEPVTCKAPC
RAILNPYCQIDVRGKLWICPFCLQRNAFPPHYKDISNTNLPAELLPKFTTIEYTLSRASQ
VPPIFLFVVDTCLEDDDLKALKDSLVVSLSLLPPKALVGLITFGTMTQVHELGYSECPKS
YVFRGTKEFSSKQIQEMLGLSGPGVRPAMQRTGQPGVAQNLSASRFLLPVEQCDFQLTSI
LEQLQRDPWPVANDKRPQRCTGVAMSVAIGLMEATYSNTGARIMLFCGGAATEGPGMVVG
NELKEPIRSHHDIEKDNVKYYKKATKFYEALAKRASANGHIVDIFAGCLDQVGLLEMKSL
VNSTGGFMILSDSFTTAIFKQSFQRIFNKDAQSNLQMGFNATIDVQTTREMRVCGLIGHA
ISANKKSASVAETEIGIANTSAWKMCGINPKTTVAVYFEVVSQHGQPLQPGSRGLIQFLT
HYQHSSGQFRLRVTTVARNFAEGNSPQIAQSFDQEAAAVLMARIAVFKAEIDDGPDVLRW
LDRMLIRLCQKFADYVKEDPSSFRLATNFSIYPQFMFHLRRSQFLQVFNNSPDETAFYRH
VLNHEDVNNSLIMIQPTLMSYGFVQPPQPVLLDSISIKPDVILLLDTFFHILIFHGETIA
QWRKAGYQDQEGYENFKELLEAPKADSEELLADRFPIPRYIVCDQHGSQARFLLSKLNPS
TTHVSGSMYGTPQGQAIFTDDVSLQVFMEHLKKLAVSGST
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atgaattttgaagaaatcgaagaacaagatggaactcgcttctcttggaatgtgttcccg
gcttcccgcttggatgctacaagaatagtagttcctatatcttgtctttacactccactt
agagagagggaagatctaccaccaatttattatgaaccagtaacttgtaaagctccttgt
cgggcaattttgaatccttactgtcaaattgatgttcgcggcaaactttggatctgtcct
ttctgccttcaaagaaacgcattccctcctcattataaagatatctctaacactaatctt
cctgccgagttgttgcctaagtttactacaattgaatatactctttcccgtgcttctcaa
gttcctccaatctttttgtttgtggtggatacttgcttagaagatgacgatttgaaagca
ttgaaagactctttggtcgtcagcttaagtttattaccacccaaggcattagttggtctt
attacgtttggtactatgactcaagttcatgaacttggttatagtgaatgtccaaaatca
tacgttttccgcggaactaaagagttttcatctaaacaaattcaagaaatgcttggtttg
tcaggacctggggtgcgtccagcgatgcagaggactggtcagcctggtgttgctcaaaat
ttgagtgccagccggtttcttttaccagttgagcaatgcgattttcaattgacatctatt
ttggagcaacttcaacgtgatccttggccagttgccaatgataaacgtccacaaagatgt
actggtgtagcaatgagcgtggccattggtttaatggaggccacttactcgaacactggt
gcacgtattatgctattctgcggcggtgctgcaacagaaggtcctggtatggttgtgggt
aatgaattaaaagaaccaattcgatctcaccatgatattgagaaggataacgtaaaatac
tataagaaggctactaagttttatgaagctttagcgaaacgtgcatcagcaaatggtcat
attgttgatatctttgctggatgtcttgaccaggttggattgcttgagatgaaatcgctg
gtaaattccactggaggatttatgattctctctgattctttcacaactgctatcttcaaa
caaagttttcagagaatctttaataaagatgcacaaagcaacttacaaatgggattcaat
gcaactatagatgttcagactacacgagaaatgcgagtatgtggcttaattggtcatgct
atctcagccaataaaaaaagtgcatcagttgcagagacagaaattggtattgccaacaca
tcagcgtggaaaatgtgtggaataaacccaaagactacagtggcggtatattttgaagta
gtcagtcaacatggacaaccacttcaacctggttcacgtggattgattcaatttttaact
cattaccaacattctagtggacaattccgattgcgtgttacaacagttgccaggaacttt
gctgaaggaaatagtccacaaattgctcaatcttttgatcaagaagctgctgctgttctt
atggctcgtattgcagtattcaaggcagaaattgatgatggaccagatgtattgagatgg
ttggatcgcatgttgattcgtttatgtcaaaagtttgctgattatgtaaaggaagatcct
tcatcatttcgccttgcaacaaacttctctatatatcctcaatttatgttccaccttaga
agaagtcaatttttacaggtttttaataacagccctgatgaaacagccttctatcgccat
gtattaaatcatgaagatgtaaataattctctgatcatgattcaacctacgcttatgtct
tacggtttcgtccaaccaccacagccagtacttttagattcaatttctataaaacctgat
gttattttgttacttgatacatttttccatattcttattttccatggtgagacaattgct
caatggaggaaagcaggatatcaagaccaagaaggttatgaaaatttcaaagaattacta
gaagcaccaaaggccgattcggaggaacttttggcggatcgatttcctattcctcgttat
attgtctgtgaccaacatggctcacaagctcgctttttactttccaaattaaatccttct
actacacatgtttctggaagcatgtatgggacaccacaaggacaagctatttttaccgat
gatgttagtttacaagtgtttatggaacatttgaaaaaattggcagtaagcgggtcaaca
taa
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