KEGG   Rhizophagus irregularis: OCT59_018782
Entry
OCT59_018782      CDS       T10295                                 
Name
(RefSeq) uncharacterized protein
  KO
K12881  THO complex subunit 4
Organism
rie  Rhizophagus irregularis
Pathway
rie03013  Nucleocytoplasmic transport
rie03015  mRNA surveillance pathway
rie03040  Spliceosome
Brite
Messenger RNA biogenesis [BR:rie03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     OCT59_018782
    TREX complex
     OCT59_018782
Spliceosome [BR:rie03041]
 Complex C
  Other components
   EJC/TREX
    OCT59_018782
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    OCT59_018782
SSDB
Motif
Pfam: RRM_1 FoP_duplication Btz RRM_3
Other DBs
NCBI-GeneID: 36871313
NCBI-ProteinID: XP_025169988
LinkDB
Position
28:complement(642406..644945)
AA seq 258 aa
MSGTLNMAIDDYSSNRKPKGRSSRRGGRVSSGSTSNRSARTRNAPYVRQRPPRGDINGQW
SHDLFEDSNSNSRRSNATSSRRNTSNSNGNNKLIVENLFYEVTQEDLEELFSECGTVKKV
YIHYDRAGRSTGVADVVFETPSEAEAALRKYNGKTLDGLQMKIKYAPLKPTQKNATIRGS
SNSNGGGSIMDRLGGIPVKSARGNIRERLGNSSPAAHRGRGRGRGRGSNNSQKPSNRKPV
TYDDLDADLDAYMAIDDL
NT seq 777 nt   +upstreamnt  +downstreamnt
atgagcggtactttaaacatggcaattgatgattatagttctaatagaaaaccaaagggg
agatcatctcgaaggggtggacgtgtttcttccggaagtacttcaaatcgcagtgctcgt
actagaaatgccccctacgtacggcagcgtcctccaagaggtgatataaatgggcaatgg
tcccacgatcttttcgaggacagtaactctaacagtcgccgttcaaatgcaaccagttct
cgacgaaatacttctaactctaatggaaataataaattgattgtggaaaacttattttat
gaagtaactcaagaagatcttgaggaattattttctgaatgtggtaccgtaaagaaagtt
tatatacactatgatcgtgccggtcgaagtactggtgtagctgatgtggttttcgaaaca
ccatcagaagccgaagcggctctgcggaaatataatggaaagacacttgatggacttcaa
atgaaaattaaatatgctccgttgaaacctacacaaaaaaatgcaaccatacgcggttca
tctaactctaatggtggcggctcaattatggatcgcttaggtggtataccagttaagtct
gctcgcggaaatattcgagaaaggctaggtaattcttcacctgcagcacatcgaggtcgt
ggtcgcggacgtggacgtggcagtaataattcacaaaaaccgtctaatcgtaagcctgtc
acatatgatgaccttgatgcagatttagatgcttatatggccattgatgatctttaa

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