KEGG   Rhizophagus irregularis: OCT59_018796
Entry
OCT59_018796      CDS       T10295                                 
Name
(RefSeq) uncharacterized protein
  KO
K12850  pre-mRNA-splicing factor 38B
Organism
rie  Rhizophagus irregularis
Pathway
rie03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:rie00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    OCT59_018796
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:rie03041]
    OCT59_018796
Spliceosome [BR:rie03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    OCT59_018796
 Complex C
   U4/U6.U5 tri-SnRNP related factors
    OCT59_018796
SSDB
Motif
Pfam: PRP38
Other DBs
NCBI-GeneID: 36871322
NCBI-ProteinID: XP_066004887
LinkDB
Position
28:complement(674749..676820)
AA seq 321 aa
MKQSNKLETWGSETTMNLNNILYQNIQASPYFKHLYELKTYHEVIDEIFNHVESLEPFLK
GTTASTAFCLLYKLWTLRLTVKQVNGLIEHTDSPHIRALGFLYLRYVCKPIHLWEWFEEY
LDDEEEVQIQGGPRPVIITIGKMCRQLLTEQKWLGTILPRIPVPIAREIEQKLKEKSQPP
LPPRRESPTYDLELKRSAERSIRREDDDRNYGRSRSRSAERRSHRVRDYEHERSRRERRD
RDRDSDRDRDRDHRDRRRSRSRSRHRRHRSSSRDRKDRDRRGSHDYDRRGSYDHDRKYDD
DRRRRHDDDRYERRRSRSPRS
NT seq 966 nt   +upstreamnt  +downstreamnt
atgaaacaatcaaataaattagaaacatggggaagcgaaaccactatgaacttaaacaac
attttatatcaaaacattcaagcttcaccttattttaaacatctttatgaattaaaaacc
tatcatgaagttatcgatgaaatttttaatcacgttgagtctctcgaaccttttcttaaa
gggacaacagcatcaactgccttttgtttactttataaactttggactttacgactaaca
gtaaaacaagttaatggattgattgaacataccgattctccacatatacgcgctttaggg
tttctttatcttcgttatgtgtgtaagccaattcatttatgggaatggtttgaggaatat
ttagatgacgaggaagaagtccaaatccaaggcggtcctcgcccagtcattataactatc
ggaaaaatgtgtcgccaattgttaacggagcaaaaatggcttggaactattttacctcgc
attccagtaccaatcgcccgcgaaattgaacaaaagttaaaggaaaagtctcaacctcct
cttccaccaaggagagaatctcctacgtatgatttagaacttaaacgttccgcagaacgt
tctataagacgtgaagatgatgatcgaaattatggacgcagtcgtagccgcagtgctgaa
agaagatctcaccgggttcgagattatgaacatgaacgtagtcgtcgagaacgtagagat
agagatagagatagcgatcgtgaccgtgaccgtgatcaccgcgaccgtcgacgcagtaga
agtcgtagtcgtcacagaagacatagaagttctagtcgcgatcgtaaagatcgggatcgt
cgtggtagccatgattatgatcgtcgtggtagttatgatcacgataggaagtatgacgat
gatcgaagaagaaggcatgatgatgatagatacgaacgtcgtagaagcagaagtccaaga
agttaa

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