Rhizophagus irregularis: OCT59_019559
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Entry
OCT59_019559 CDS
T10295
Name
(RefSeq) uncharacterized protein
KO
K14304
nuclear pore complex protein Nup85
Organism
rie Rhizophagus irregularis
Pathway
rie03013
Nucleocytoplasmic transport
Brite
Messenger RNA biogenesis [BR:
rie03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
OCT59_019559
Chromosome and associated proteins [BR:
rie03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
OCT59_019559
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
36863165
NCBI-ProteinID:
XP_066005345
LinkDB
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Position
29:complement(946091..949766)
Genome browser
AA seq
744 aa
AA seq
DB search
MSLFPEHNSNILQFTPFTFEPPPVDYSQFEGISSFPSSTQFYEASVITEAFLKEDAYLGK
GKGKQVEENDLKPETRKQTIFLNPLFKYDSNFWSTSNQSTGVKFHPTRSKDFACYVFGKE
PKEKVKKESFTLDTQIYNCSLVHDIDSRRVFYNEAFSIFREAARAPFSKEWREKSMREKL
LCDISWNYVNAIVNHIKSLQEIPIKDKQIQNEISTFRDMMAIWELCRIMYFIKSERYQRL
STDLLTWLNECYPLGEEELNELRDSPNLRNTVTFWSRLYKLILRGLFPQAINFLRSIIMA
VEITSDQIINREIIINDIIQSVIKCIKSRPKMSSYDTGLAWRNWLSQCSQLQKSIILENK
FLEENFIMILKILSGDPDAILAKSSSWLEGLVALVYHKYPKCETSDVRSTLGPVFIRFSV
HPDPTSQALKRIFYQRIDDALSYCKHIDPWLLSHLTDLLCKTDLDETIGGKSLLLHQHRE
GYLIKFAEPLLTHSTLWQVGFKYLEHCEKFGKVFMEEFVGKIPFDNERKFEKILKICEDN
GLKFDEKCIITTMGTKYMQIKRYASTIIYYMRAGKDESLKAICNIFLTQYVESGKIMFSE
VLDSIPVDKNSNESVNFLSRYRLYHSLIQDEFYVQAAQVLVECLRSEISPKEFWGVLLFH
TVPLMKLGRRKGIKLFEKIHIDEFIYYCSQVLDKRIEDSWLKLVQRMKRWHYKETGYFDI
SEDLNPVKIECERYKKNLEKNHSV
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atgtcattatttccagagcataattcaaatattttacagtttacaccttttacctttgaa
cctccaccagttgactattcgcaattcgagggtataagctcatttccttcttcaacacaa
ttctatgaggcttctgttattactgaagctttcttaaaggaagacgcgtatcttggcaag
ggaaaaggaaaacaagttgaagaaaatgaccttaaaccagaaactcggaaacaaactatc
tttcttaacccactttttaaatatgattcaaatttttggtctacttcaaatcaaagtact
ggagttaaatttcatcctactcgttcaaaagattttgcgtgttatgtttttggaaaggag
ccgaaagagaaggtcaaaaaagagagtttcactttggatactcaaatttataattgttcc
ttagtacatgatatagactctcgaagagtattttacaatgaagctttttctattttccga
gaagcagccagagcaccctttagcaaagaatggcgcgaaaagtcgatgcgagaaaaatta
ctatgtgatatctcatggaattatgtaaacgctatcgtgaatcatattaagagtcttcaa
gagatcccaattaaagataaacaaatccagaatgaaatcagtacatttagagatatgatg
gccatttgggagttatgtcgaattatgtatttcatcaaatctgaaagatatcagagatta
tcaacagatttattgacttggttaaatgaatgctaccccttaggagaagaagaattgaat
gagttaagagatagtcctaatcttcgtaacactgtgactttctggtcaagattatataaa
ttaattcttcgcggtttgtttccacaagcgataaattttttaagaagtataattatggca
gtggaaattacaagtgatcaaatcattaatagagaaattataataaatgatattatacaa
tccgttataaagtgcataaaatctagaccaaaaatgtcttcatatgatacaggtttagct
tggagaaattggctttcgcagtgctcacaattacaaaaatctataattctggagaataaa
tttttagaggagaattttattatgattctgaaaatattatccggtgatcctgatgccatt
ctagctaaaagttcttcgtggttggaagggttagtcgccctagtttatcataaatatcct
aaatgtgaaacttcagatgtaagatctacgttagggccggtttttattagattctctgta
catcctgatcccactagccaggctctaaaacgaattttttatcaacgtattgatgacgca
ttaagctactgtaaacatatcgatccgtggttgttatcacatttaacagacttactttgc
aaaaccgacctggatgaaacaataggcggaaagagcttattgttgcatcagcatcgtgaa
ggttatttaattaaatttgcggaaccattattaacgcactctacactatggcaggttggg
tttaaatatttggagcattgcgagaaatttggaaaagtatttatggaagaatttgttgga
aaaattccctttgataacgagagaaaattcgagaaaatattaaagatttgtgaagataat
ggattaaaattcgacgagaagtgtatcattacgactatgggcaccaaatacatgcagata
aagagatatgcttcaactattatttattatatgcgagcaggaaaagacgaaagtcttaaa
gcaatttgtaatatatttctaacacagtatgttgaatctggtaaaattatgtttagtgaa
gtacttgatagtattcctgttgataaaaattccaatgaatcggttaactttctgtcaaga
tatagattgtatcattctttaatccaggatgaattttatgtccaagcagcacaagtacta
gttgaatgtttacgctctgaaatatcaccaaaagaattttggggcgtattattgtttcat
acagtaccattaatgaaattaggccgaagaaaagggataaaattattcgagaagatacat
attgacgaatttatatattattgttctcaagtacttgataaaagaatagaggattcatgg
ttaaaattagtacaaaggatgaaaagatggcattataaggagactggttattttgacatt
tcggaagatctgaatccagtaaagattgagtgtgaaagatacaagaaaaatttagaaaaa
aatcattctgtttaa
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