KEGG   Rhizophagus irregularis: OCT59_019764
Entry
OCT59_019764      CDS       T10295                                 
Name
(RefSeq) uncharacterized protein
  KO
K11790  denticleless
Organism
rie  Rhizophagus irregularis
Brite
KEGG Orthology (KO) [BR:rie00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:rie04121]
    OCT59_019764
Ubiquitin system [BR:rie04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     OCT59_019764
SSDB
Motif
Pfam: WD40 WD40_CDC20-Fz WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 WDR55 Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EIPR1 EIF3I Beta-prop_RIG_2nd Beta-prop_EML Beta-prop_IFT122_1st Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_DCAF4 Beta-prop_SPT8 Beta-prop_HPS5 Beta-prop_IFT140_1st Beta-prop_SCAP PEP5_VPS11_N Beta-prop_Vps41 Beta-prop_WDR19_1st WD40_MABP1-WDR62_1st Beta-prop_DCAF12 WD_LRWD1 WDR90_beta-prop_4th WD40_RFWD3
Other DBs
NCBI-GeneID: 36867617
NCBI-ProteinID: XP_025178593
LinkDB
Position
29:1958781..1960626
AA seq 496 aa
MAENSCRRRKKQTQDNNILVFLTPPPLSDITRQINNANCRLETSEPVTPTPGVPPKKRIK
CDNLQNDSQPDFFANIPDNIPVSTSSRLIKDTDLYYGLSLQNALFQREIWGSTIMGGSTM
ASRRWNVSTRFFIKDFKTTDNNVFRFLGDRNFVAPFVCSFSHVACNGKLLAAADEEGMVG
FIDARYDNTIELERVRNEFRAHDNAVFDVVWSHDDCSMVTASGDQTAKLWDVELQQCKST
FGGHTCSVKSVNFNPLNPNLWVTSSRDGNIFIWDTRLIGMCSEAFKPIISIRNAHSHGIS
KKRSKKSSQLPPVRSKPTSSVTGVQFLLNQDLLLASSGASDSIIKYWDLRNQDASSNPTP
VQTSVNGSLAKRPHGISDLILDKSGTRLYANSTDNYVYMYDAANLGAPIGYFTSQTYRCS
TFYIRLACSPDGRYIASGSSDKSIYIWEVDFPGAEPVVLKAHESEVTSLSWSKDIETIAS
CSDDTTLRIWRIGGSS
NT seq 1491 nt   +upstreamnt  +downstreamnt
atggcagaaaattcatgtcgtcgacgtaagaagcaaactcaagataacaatattctagta
tttttaacgccacctccattatctgatattacgcgtcaaatcaacaatgcgaattgcagg
cttgaaacttcagaacctgttaccccgactccaggtgtaccacccaagaaaagaataaaa
tgtgataatttacaaaatgattcccaacctgattttttcgcgaatataccagataatatt
ccagtttcaacatcttcgcgtctaattaaggacaccgatttgtattatgggttaagtttg
cagaatgcattatttcaaagggaaatttggggatctactattatgggtggttcaactatg
gcttcaaggagatggaatgtttcgacgcgtttttttataaaagattttaaaaccacggat
aataatgtgtttagatttcttggtgatcgaaatttcgtcgcgccatttgtttgttctttc
agtcatgtggcttgtaacggaaagcttttagccgcagcagatgaagaaggaatggtggga
tttattgatgctagatatgacaataccattgagcttgagcgggttcgtaatgaatttcgt
gcacacgataatgccgtttttgatgttgtgtggagtcacgatgactgttcgatggttact
gcttccggtgaccaaactgcaaaactatgggatgtggaattacaacaatgcaagtcaaca
tttggaggacatacttgtagtgttaaatctgtcaattttaatcctttaaatccaaatttg
tgggtaacttcttcaagagacggaaatatatttatctgggatacccggttaattggaatg
tgttctgaagcttttaagccaattattagcattcgcaatgcacattcgcatggcatctca
aagaagagatcaaaaaaaagtagtcaacttcctccagttaggagcaaaccaaccagcagt
gtaacgggagtacaatttttattgaatcaagatttattattggcatcctctggggcaagt
gatagtatcatcaaatattgggacctacgaaatcaagacgcatcaagtaatccaacgcca
gttcaaacatctgttaacggttcattggccaaacgaccccatggtatatcagatttgatt
ttggataaaagtggtactcgtttatacgccaatagtacggataactatgtttatatgtat
gatgctgctaatctgggagctcctattggttattttacaagtcaaacttacagatgttct
acattctatattcgattggcttgttcacctgatggtcgttatattgcgagtggatcaagt
gataaatctatttatatttgggaggttgattttcctggtgctgaaccagttgttttgaaa
gctcatgagagtgaagttacaagtttaagttggtcaaaagatattgaaacaatcgcttcc
tgttccgatgatacaactctgcgtatttggcgaattggtggatcaagttaa

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