Rhizophagus irregularis: OCT59_019764
Help
Entry
OCT59_019764 CDS
T10295
Name
(RefSeq) uncharacterized protein
KO
K11790
denticleless
Organism
rie Rhizophagus irregularis
Brite
KEGG Orthology (KO) [BR:
rie00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rie04121
]
OCT59_019764
Ubiquitin system [BR:
rie04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
OCT59_019764
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
EIF3I
Beta-prop_RIG_2nd
Beta-prop_EML
Beta-prop_IFT122_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
Beta-prop_DCAF4
Beta-prop_SPT8
Beta-prop_HPS5
Beta-prop_IFT140_1st
Beta-prop_SCAP
PEP5_VPS11_N
Beta-prop_Vps41
Beta-prop_WDR19_1st
WD40_MABP1-WDR62_1st
Beta-prop_DCAF12
WD_LRWD1
WDR90_beta-prop_4th
WD40_RFWD3
Motif
Other DBs
NCBI-GeneID:
36867617
NCBI-ProteinID:
XP_025178593
LinkDB
All DBs
Position
29:1958781..1960626
Genome browser
AA seq
496 aa
AA seq
DB search
MAENSCRRRKKQTQDNNILVFLTPPPLSDITRQINNANCRLETSEPVTPTPGVPPKKRIK
CDNLQNDSQPDFFANIPDNIPVSTSSRLIKDTDLYYGLSLQNALFQREIWGSTIMGGSTM
ASRRWNVSTRFFIKDFKTTDNNVFRFLGDRNFVAPFVCSFSHVACNGKLLAAADEEGMVG
FIDARYDNTIELERVRNEFRAHDNAVFDVVWSHDDCSMVTASGDQTAKLWDVELQQCKST
FGGHTCSVKSVNFNPLNPNLWVTSSRDGNIFIWDTRLIGMCSEAFKPIISIRNAHSHGIS
KKRSKKSSQLPPVRSKPTSSVTGVQFLLNQDLLLASSGASDSIIKYWDLRNQDASSNPTP
VQTSVNGSLAKRPHGISDLILDKSGTRLYANSTDNYVYMYDAANLGAPIGYFTSQTYRCS
TFYIRLACSPDGRYIASGSSDKSIYIWEVDFPGAEPVVLKAHESEVTSLSWSKDIETIAS
CSDDTTLRIWRIGGSS
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaaattcatgtcgtcgacgtaagaagcaaactcaagataacaatattctagta
tttttaacgccacctccattatctgatattacgcgtcaaatcaacaatgcgaattgcagg
cttgaaacttcagaacctgttaccccgactccaggtgtaccacccaagaaaagaataaaa
tgtgataatttacaaaatgattcccaacctgattttttcgcgaatataccagataatatt
ccagtttcaacatcttcgcgtctaattaaggacaccgatttgtattatgggttaagtttg
cagaatgcattatttcaaagggaaatttggggatctactattatgggtggttcaactatg
gcttcaaggagatggaatgtttcgacgcgtttttttataaaagattttaaaaccacggat
aataatgtgtttagatttcttggtgatcgaaatttcgtcgcgccatttgtttgttctttc
agtcatgtggcttgtaacggaaagcttttagccgcagcagatgaagaaggaatggtggga
tttattgatgctagatatgacaataccattgagcttgagcgggttcgtaatgaatttcgt
gcacacgataatgccgtttttgatgttgtgtggagtcacgatgactgttcgatggttact
gcttccggtgaccaaactgcaaaactatgggatgtggaattacaacaatgcaagtcaaca
tttggaggacatacttgtagtgttaaatctgtcaattttaatcctttaaatccaaatttg
tgggtaacttcttcaagagacggaaatatatttatctgggatacccggttaattggaatg
tgttctgaagcttttaagccaattattagcattcgcaatgcacattcgcatggcatctca
aagaagagatcaaaaaaaagtagtcaacttcctccagttaggagcaaaccaaccagcagt
gtaacgggagtacaatttttattgaatcaagatttattattggcatcctctggggcaagt
gatagtatcatcaaatattgggacctacgaaatcaagacgcatcaagtaatccaacgcca
gttcaaacatctgttaacggttcattggccaaacgaccccatggtatatcagatttgatt
ttggataaaagtggtactcgtttatacgccaatagtacggataactatgtttatatgtat
gatgctgctaatctgggagctcctattggttattttacaagtcaaacttacagatgttct
acattctatattcgattggcttgttcacctgatggtcgttatattgcgagtggatcaagt
gataaatctatttatatttgggaggttgattttcctggtgctgaaccagttgttttgaaa
gctcatgagagtgaagttacaagtttaagttggtcaaaagatattgaaacaatcgcttcc
tgttccgatgatacaactctgcgtatttggcgaattggtggatcaagttaa
DBGET
integrated database retrieval system