Rhizophagus irregularis: OCT59_020346
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Entry
OCT59_020346 CDS
T10295
Name
(RefSeq) uncharacterized protein
KO
K14530
ribonucleases P/MRP protein subunit RPP40 [EC:
3.1.26.5
]
Organism
rie Rhizophagus irregularis
Pathway
rie03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
rie00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
OCT59_020346
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rie03009
]
OCT59_020346
03016 Transfer RNA biogenesis [BR:
rie03016
]
OCT59_020346
03029 Mitochondrial biogenesis [BR:
rie03029
]
OCT59_020346
Enzymes [BR:
rie01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.5 ribonuclease P
OCT59_020346
Ribosome biogenesis [BR:
rie03009
]
Eukaryotic type
Pre-60S particles
RNases
RNase MRP
OCT59_020346
Transfer RNA biogenesis [BR:
rie03016
]
Eukaryotic type
5'processing factors
Ribonucrease P
OCT59_020346
Mitochondrial biogenesis [BR:
rie03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
RNase MRP
OCT59_020346
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonuc_P_40
Motif
Other DBs
NCBI-GeneID:
36863830
NCBI-ProteinID:
XP_025187119
LinkDB
All DBs
Position
3:<1343223..>1344722
Genome browser
AA seq
363 aa
AA seq
DB search
MSIFISEPVKSKLYISHSSITLKKSRHEQIILDHPFNNNLDIFFPSIINSKKITSLFNNE
FFYYKVDLPLSWFIERDFIRDYVKSGCVVALSLTEGIDIANVIALDSLGTLILNLTKDTY
EELGLDGKSTKFGPDKQRFVVQIDLKEKSLIPGKKGYERIKWCFNNTLTKKFTFLISFVK
SGTKKSSEIDFPSLFNAEKILGKFDFNNTFDNILIPDLNMIKNISNEFQWRLDAVEIYDW
IGLASIQAQRIKSHDQVDPFISVYKPPEPYSNGNGSFIKYTGFIPSLTIKELFDSVSNFL
REDASNNIPWAIINVWGFKDSPISWNKHEHGYFMNGENNYSFIVYNDGTYILYQALGTYD
TYS
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
atgtcaatctttatatcagaaccagtaaaatcaaaactttatatttcacattcatccatt
acattaaaaaaatctcggcatgaacaaataatattagatcatccattcaataataattta
gatatttttttcccttcaataattaattccaaaaaaatcaccagcttatttaataatgaa
tttttttattataaggtagatttacctttatcatggtttattgaaagagattttatacga
gattacgttaaatcaggctgtgttgttgctttaagtttaaccgaaggaattgatattgcg
aatgtaatcgcgttagattcattaggaactttaatattaaatttaacgaaagatacatac
gaagaacttggattagatggtaaatcaacaaaatttggtccagataaacaaagatttgtt
gttcaaattgatttaaaagaaaaatcattaattccagggaaaaagggatatgaaagaatt
aaatggtgttttaataatacgttaacaaaaaaattcacgtttttaatttcttttgtaaaa
tcgggtacaaaaaaatcaagtgaaattgatttcccatcattatttaatgcggaaaaaatt
ttgggaaaatttgattttaataatacatttgataatattttgattcctgatttaaatatg
attaaaaatatttcaaatgaatttcaatggagattggacgctgtagaaatttatgattgg
atcggattagcttctattcaagctcaaagaattaaatcacacgatcaagttgatccgttt
atatctgtttataaacctcctgaaccatattcaaacggaaatggatcatttattaaatat
acgggattcatcccatctttgaccattaaagaattatttgattcagtttcaaacttcctt
cgagaggatgcaagtaataatattccatgggctataattaatgtatggggattcaaagat
tctccgatttcttggaataaacatgaacatggatattttatgaatggtgaaaataattac
agttttatcgtttataatgatggaacttatattttatatcaagctcttggtacttacgat
acttactcttaa
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