Rhizophagus irregularis: OCT59_020373
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Entry
OCT59_020373 CDS
T10295
Name
(RefSeq) uncharacterized protein
KO
K14309
nuclear pore complex protein Nup93
Organism
rie Rhizophagus irregularis
Pathway
rie03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
rie00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
OCT59_020373
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rie03019
]
OCT59_020373
Messenger RNA biogenesis [BR:
rie03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
OCT59_020373
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nic96
Gal4_dimer
Motif
Other DBs
NCBI-GeneID:
36863844
NCBI-ProteinID:
XP_065990087
LinkDB
All DBs
Position
3:<1475317..1479544
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AA seq
901 aa
AA seq
DB search
MATTNQLKQLAERSRKVANAIVKQDIPTIERNLEQIEKQSRKLADKVIKPGEEPERKAPY
FLANIGIDGDRLSQEVKSINVLGAFEPRDILPDTDVEKFIEHKHQQTISNIIKDGHTQTI
NDYNAYFDRCLIQDWDKTKRKVFEELGQHIPTGTSSNSSDLFSTPGNSRSIFQTPLRGAP
SGSFPGPSTPRSSYVTAGERTVSFRSESASQLNQRHLIYFDIVSKLNNFRLSKIEYGVVN
EFTNAAKKLGVDYVKKLVQCWQSLISIVGENNVIDGRFARYPLKERHYAKSYMAPASSPE
NKELYRNLLNGAKRYLEESYRAYSLEYVNSFRTEALLGGQPSVSNTARAMLRAIHRPNGG
IPINNLTMAENIPIWGHIYILLRQGHYQDALQVAEGYKSNFSKTDQTFIVYFTKYINNNN
SLPSDDRQKLMTEIKQWPPFPHLYDPYKCLLYQIIAQMEELPQRPPTDSISPTFEDFMWL
HLMCISEIDMESKTGSDILSLERFQKKVRDLGPAHFNHSGKDPMQYFRVLLLTLQFEKAI
YYLYHEYTEDAVHFAISLAYYGLLRVPESAEAMALIIDEDESRPKLNFNTIIYQYVRKLA
NDKASSTAFQYLILLCLYGNRQTDSGRHQVELCHYYVRQLVYDTEAFSELVGDVRSREGQ
IKKYMPLMYIDDEQEFNEIIVYELAQQCVEDGKFKAAQSLYELTENYEKIIVLLNKMLAE
YIWVSIQGVSMQPESAQELNPQEIKKVLQDYKKHQIIMRLPAERIQTCEKLLGLVDFIEL
YKKQDFENALSVIQNVDLFPFEEDVSIIKQKAAAIDGFDGQLKNCVAELLLITMRCIHSR
YEQLKEQTSFMSPSPSNKHLDDTFVLRQKAKCLVSFVGYLKSSAITSDVFQKLNEFEVLM
R
NT seq
2706 nt
NT seq
+upstream
nt +downstream
nt
atggctactactaaccaactgaagcaacttgcagaaagatctcgtaaggttgcaaatgca
atcgtaaaacaagacataccgaccattgagcgaaatttggaacaaattgaaaaacagtcg
cgtaaacttgctgataaagttataaaacctggagaagaacctgaaagaaaagccccctat
tttttagcgaatattgggattgatggtgatagattatcacaagaagttaagagtataaat
gtattgggtgcttttgaaccacgggatattttaccagatacagatgttgagaaatttatt
gaacataaacatcaacagacgatttccaatattattaaagatggacatacacagaccata
aatgattataacgcctattttgatcgatgtcttatacaagattgggacaagacaaaaaga
aaagttttcgaagaactcggtcagcatattccaactggtacttccagtaatagttctgat
ttattttctacaccagggaatagtcgttctatatttcaaactccattgagaggggctcct
tcaggaagttttcctggaccttcaaccccgagatcatcttatgtaactgcaggagaaaga
acagtatcattcaggagcgaatcagcttcacaattaaatcagagacatctgatatatttt
gatatcgtatctaagttgaacaattttagattatcgaagatagagtatggtgttgtaaat
gaatttacaaatgccgccaaaaaacttggtgtagattatgtaaaaaaattagttcaatgt
tggcagagtcttatatcgattgttggagaaaataatgttatagatgggcgttttgcccgt
tatcctttaaaagaacgccattatgctaaatcatatatggcacctgcttcaagtccggag
aataaagaactctacagaaatttattaaacggggcgaaacgttatctggaagaatcatat
cgcgcatattcattagaatatgtgaattcattccgtaccgaagctctattaggcggacag
ccgtccgtaagtaatacagctcgtgctatgctacgtgctatccatagacctaatggagga
attccaataaataacttaacgatggcggaaaatatcccaatatggggacacatttatatt
ttgcttcgtcaaggtcattatcaggatgctttgcaggttgcagaaggttataaaagcaac
ttttcaaaaacagaccagacgtttatcgtatattttacaaaatatataaataacaataat
agtcttccttcggatgaccgacaaaaattaatgacagaaattaaacaatggccacctttt
ccacatttatatgacccgtataaatgcttactatatcaaataattgctcagatggaagaa
ttaccccaaaggccaccgacagacagtattagtcctacatttgaagattttatgtggttg
catctaatgtgtattagtgaaatagatatggaaagtaaaaccggttcagatattctctca
cttgagagatttcaaaagaaagtacgggatttaggccccgctcattttaatcatagtggt
aaagatcctatgcaatatttccgtgttttattgttaactcttcaatttgaaaaggcgata
tattatctctaccatgagtatactgaggatgctgtacattttgctatatcacttgcatat
tatggattacttagagttccagaatctgcagaagctatggcattaattattgatgaagat
gaatctcgtccaaagcttaattttaacacaattatatatcaatatgtgcgtaaattagcc
aatgataaagcttctagcacagcattccaataccttattttactttgtctgtatggaaac
cgccaaacagacagtggacgacatcaggttgagttatgtcattattatgttaggcaactt
gtatatgacacagaagcgttttcagaattggttggtgatgttcggagtagagagggccaa
ataaaaaaatatatgcctttaatgtacattgatgatgaacaagaattcaatgaaattatt
gtttatgaacttgctcaacagtgtgttgaagatggaaaatttaaagcagctcagagtctt
tatgaattaacagagaattatgagaaaatcattgtgttgcttaataagatgttagcggaa
tatatatgggtttccattcaaggtgtttcaatgcaaccagaaagtgcacaggaattgaat
cctcaagaaattaaaaaagtgttacaggattataaaaaacatcaaataataatgagatta
ccagcagaacgtatacagacgtgtgaaaaattactcggtctggttgactttatagaattg
tataaaaaacaagattttgagaatgcccttagtgttatacaaaatgttgacctctttccc
tttgaagaagatgttagcataattaaacaaaaagctgctgcaatagatgggtttgatggt
caattgaagaactgtgtggcagaacttctacttatcacaatgcgctgtatacattcacgt
tatgaacaattgaaagaacaaacttcatttatgtcaccgagtccttcgaataaacattta
gatgatacttttgttcttcgacaaaaggctaaatgcctagtttcatttgtaggatattta
aaatcaagcgcaattacatcagacgtttttcaaaaattaaacgagttcgaagttctaatg
agataa
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