Rhizophagus irregularis: OCT59_020384
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Entry
OCT59_020384 CDS
T10295
Name
(RefSeq) uncharacterized protein
KO
K14778
ATP-dependent RNA helicase DDX49/DBP8 [EC:
5.6.2.7
]
Organism
rie Rhizophagus irregularis
Brite
KEGG Orthology (KO) [BR:
rie00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rie03009
]
OCT59_020384
Enzymes [BR:
rie01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
OCT59_020384
Ribosome biogenesis [BR:
rie03009
]
Eukaryotic type
90S particles
Helicases
OCT59_020384
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
AAA_22
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
36874577
NCBI-ProteinID:
XP_025187158
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All DBs
Position
3:1505469..1508059
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AA seq
475 aa
AA seq
DB search
MTLNNKTNISLESEKFINVIESQKTSKNPSKTFEELGLNPWLIDALKAMSIKFPSEIQKV
CIPQILNGKDCIGGAKTGSGKTAAFALPILQKLSEDPFGVFALVLTPTRELAFQIADQFR
VLGKSINLKECVVVGGLDMMSQSLQLSRKPHVVIATPGRLVDHINSSAIAPCLSRIRFLV
LDEADRLLSDTFAEDLAVIFDTIPKKRQTLLFTATMTENILQLQDAQEEDPNRKPFIYQV
KSDISTVSTLSQFYVFIPSHIREPYLTHLLRSEELSNKSTIIFCGRCRTAELLRVMLVEL
DIRCTSLHSMMSQKERLNSLGKFKAEIVRVLIATDVGSRGLDIPTVQLVVNFDIPRDPTD
YIHRVGRTARAGRGGIALSIVTERDIELVQNIETRINKKMEEWKINENKVLESLNEIATA
KRVATMHLHDTNFGASKEIQKKKHSLLETKSTRNVISKKRFKKNEKGKDKIKKIL
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgacattaaataataaaaccaatatttctttagaatcggaaaaatttatcaatgtcatt
gaatcacaaaagacatcaaagaatccctcaaaaacatttgaagaattagggttaaatcca
tggttaattgatgcattaaaagcaatgtcaataaaatttccttcagagatacaaaaagtt
tgtataccacagatattgaacgggaaagattgtataggaggagcaaaaacaggttcagga
aaaactgctgcattcgccttaccaattttacaaaaattgtcggaagatccatttggtgtt
tttgctcttgttttaactccaacaagagaattggcttttcaaatcgccgatcaatttcga
gtacttggaaaaagtataaatcttaaagagtgtgtcgtagttggaggacttgatatgatg
agccaatcattacaattatccaggaaacctcatgtagttatagcaacacctggtcgactt
gtagatcatatcaatagtagcgcaattgcaccttgtttaagcagaataagatttttggtt
cttgatgaggcagatcgtttattatctgatacatttgctgaagatcttgcagttatattt
gatactataccaaaaaaacggcaaacattgttatttacagcgacaatgacagaaaatatc
ttgcaattacaagatgcgcaagaagaagaccctaacagaaaaccctttatttatcaagtt
aaatcagatatatcgacagtatcaacgttgtcgcaattttatgttttcatcccgtcacac
atacgtgagccatatttaactcatcttctaagatcagaagagctttcaaataaatctacc
ataatattttgtggtagatgtagaactgctgaattgctacgtgttatgcttgtagagttg
gacattcgttgtacaagtttacattctatgatgagtcaaaaagaaagattaaacagtttg
ggtaaattcaaagcagaaatagtgagggtgttgattgctactgatgttggcagtcgtggt
cttgatattccgacagtgcaattagttgttaattttgatataccacgtgatcccacagat
tacattcatcgagtcggtcgtactgcaagagccggtagaggtggtatagctttatcaatt
gtaactgaacgcgacattgaacttgtacaaaatattgaaacaagaataaataaaaaaatg
gaagaatggaaaattaatgaaaataaagttttagaaagtttaaatgaaattgctaccgca
aaaagagttgcaacgatgcatttacatgataccaactttggagcttcaaaagaaatccaa
aaaaagaaacatagtcttttagaaacaaaaagtacgagaaatgttatttcaaagaaaagg
tttaaaaaaaatgaaaaaggaaaagataaaattaaaaaaattctctaa
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