Rhizophagus irregularis: OCT59_020475
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Entry
OCT59_020475 CDS
T10295
Name
(RefSeq) uncharacterized protein
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
rie Rhizophagus irregularis
Brite
KEGG Orthology (KO) [BR:
rie00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rie03000
]
OCT59_020475
Transcription factors [BR:
rie03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
OCT59_020475
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
MATalpha_HMGbox
Motif
Other DBs
NCBI-GeneID:
90975982
NCBI-ProteinID:
XP_065990146
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Position
3:complement(1889505..1890305)
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AA seq
266 aa
AA seq
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MEKKNCHLFMFDIFEPDQLPYEDSLKPCSAQKESTILTNKSKKRIKKQKKIPRPPNSFIL
YRRVKLNNILIENKKISLSEASKIIGQMWRNEDEREKLRWAILADKEKLKHAQDYPDYVY
RPKRSTKRKSNDKPDKSISGPIDRSTTTHGILHDHWSSSSTNHMTSHYAQHPSTLEVYNY
IPTSQCFNYDYSFYNFDTTSVSYNGELFYYNPITSLLSTPANPTNGELFYYNPTTSSSST
MLEDLETYFDESVSLFSAVVEGHYEY
NT seq
801 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaaagaattgtcatctttttatgttcgatatattcgaaccggatcaactacct
tatgaagatagcttaaaaccttgttctgcacaaaaagaatccacaatacttaccaataag
tctaagaaacgaataaaaaaacaaaaaaaaattcctcgaccaccaaattcattcattttg
taccgtagggtaaaattaaataatattctcatagaaaataaaaaaatatccctttcagaa
gcatcaaaaataattggtcaaatgtggcgaaatgaagatgaaagagaaaaattacgatgg
gcaatacttgcggataaagagaaactaaagcatgcgcaagattatcctgactatgtttat
cgacccaaaagatctaccaaacgaaaatctaatgataagcctgataaatctatcagtggt
cctatcgatagatctacaacaacacacggcattttacatgatcattggtcgtcttcatct
acaaaccacatgacatctcactatgcgcaacatccctcaactttagaggtctataattac
atccctacttctcaatgcttcaactacgattattctttctataattttgacactacatca
gttagttataatggagaattattttattataatccaataacctcgttattatctacacca
gctaatcccacaaatggagaattattttattataatccaacaacctcgtcatcatctacg
atgctcgaagatttagaaacttattttgacgaatctgtttcgctattttctgcggtagtt
gaaggccattatgaatattga
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