Rhizophagus irregularis: OCT59_020841
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Entry
OCT59_020841 CDS
T10295
Name
(RefSeq) uncharacterized protein
KO
K14805
ATP-dependent RNA helicase DDX24/MAK5 [EC:
5.6.2.7
]
Organism
rie Rhizophagus irregularis
Brite
KEGG Orthology (KO) [BR:
rie00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rie03009
]
OCT59_020841
Enzymes [BR:
rie01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
OCT59_020841
Ribosome biogenesis [BR:
rie03009
]
Eukaryotic type
Pre-60S particles
Helicases
OCT59_020841
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
Cas3-like_C_2
SBF_like
Endonuc-BglII
Motif
Other DBs
NCBI-GeneID:
36866923
NCBI-ProteinID:
XP_025180152
LinkDB
All DBs
Position
3:complement(3344055..3347782)
Genome browser
AA seq
832 aa
AA seq
DB search
MKREKSIRPKANFSGQFIPAEDTEAIIAEKLSKKAAKRARRQKKKQDDRLNNLPEQEWRE
ISLSNPPPVPAQEKGDFSVVVPSISKKRKRKNAVQEDNFIKNDGYVELNSLEWSEVNYPD
SIFMGDDLGGFLCLEEIDDIDVEYDDNKDTQGKTIKFKKVKSSNRLSNAKSDSPCAKPEE
PLPEEESSKYYDLDTFDESILIRNKNIREYKQSEENVGSQDDNFDNNIDQYKDDDENDED
EIDNDSKMEESVSTNINSIQDEKGTDQNAMEGIDLSAWNQFNLSPIIMNELKSLGFNKPT
PIQAKTLHFSLSGRDVIGAAETGSGKTLAFGIPILEYIFKKVKDSNQLVGLILTPTRELA
MQIRDHLQHISKNSLIKIITIVGGMSTQKQQRLLSKHPNIIVATPGRLWELFSENDAYLS
NLRRIKFLVLDEADRMLEIGHFEELNHILTVLSRTRNNTNEWAENDIKEKECTYELTPRQ
TFVYSATLNNKLKEDLKRKKYKSKKINKESTGTMTELMHRLEFNDSNPIFLDITPEDAVA
ETLQESKIDCLTKEKDIYTYYFITRYPGRTLIFVNSIDCIRRLIPVIKLLNIDVFGLHAQ
MQQRQRLKNLDRFKQNPKAVMIASDVAARGLDIPLVEHVIHYQLPRSSDIYVHRSGRTAR
SRKEGVSLMLCSPEELSLYQKLCLKLNKVDGLADFPVDRGILNSMKQRINLARQIDQDEH
KMQKMNHDNDWLKKTAQEFEIDLDDEEIVNDSNRGNQKQIKEKIRSMKLELKSLLSQPLI
PRGVSTKYLTSGIVRDLADRLLDESSHNSAILGVKNTKATDDLRSKKKTIPL
NT seq
2499 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgtgaaaaaagtatacgacctaaggctaatttttcaggccaatttattccagct
gaagatactgaagcaataattgcagaaaaattaagcaaaaaagccgcaaaacgtgctcgt
agacagaaaaaaaagcaggatgatagattgaataacctaccagaacaggaatggcgtgag
atatcattatcaaatcctcctccagtacctgctcaagaaaaaggagacttctcagtagta
gtaccatcgatcagtaaaaaacgtaaacgaaaaaatgcagtccaagaagataattttatt
aaaaacgatggttatgttgaacttaattctcttgaatggtccgaagtgaattatcccgat
tcaatttttatgggagacgatttaggaggatttttatgcctagaggaaattgatgatatt
gatgttgagtatgatgataataaagatacacaaggaaaaacgattaaatttaagaaagta
aaaagtagtaatagattatcaaatgcaaaaagtgacagcccatgcgctaaacctgaggaa
ccattaccagaagaggagtcatctaagtattatgacttggatacatttgatgagagtatt
ttaataaggaataaaaatataagagaatacaagcaatccgaagaaaatgtaggatcacaa
gatgataattttgataataatatagaccagtataaggacgatgatgagaatgatgaggac
gaaattgataatgattcaaaaatggaagaaagtgtcagcacaaatattaatagtattcag
gacgaaaaaggaacggatcagaatgctatggaaggaatcgatctttccgcatggaatcag
ttcaatctctctcctatcattatgaatgagttaaaatcactcggatttaataaacctacg
ccaattcaagcaaaaacacttcattttagtttatccggccgtgatgtcataggtgctgct
gaaactggttctggaaaaacacttgcttttggaatacctatattagagtacatatttaag
aaagtaaaggactcgaatcagcttgtagggcttattttgacgcctacaagagaattagct
atgcaaattagagaccatcttcaacatattagtaaaaattctctaataaaaattataaca
attgtgggaggaatgtctacacagaaacaacagcgattattatcaaaacatccaaatatt
attgtcgctacacctggtcgtttatgggaattattctctgagaatgatgcgtaccttagt
aatttgcgacgcataaaatttttagtattagacgaagcagatagaatgctcgaaattggc
cattttgaagagttaaaccatattctaactgttttatcgaggactagaaataacactaat
gaatgggctgaaaatgatattaaagaaaaggaatgcacttatgaacttactcctcggcag
acttttgtgtattctgctacgctcaataacaaattgaaagaagatttgaagagaaagaaa
tacaaatcgaaaaagataaataaagaatccacaggaacaatgactgaattaatgcatcgg
cttgaatttaatgattcaaatccaatatttctggatattactcctgaagatgcggttgct
gaaacattacaagaatccaaaattgattgtctgaccaaagagaaggatatatatacgtat
tattttattacgcgatatcctggtcggacccttatttttgttaacagtattgattgcatt
cgacgtcttataccagtaattaagttattaaatatcgacgtttttggacttcacgcacaa
atgcaacaaaggcagcgtttaaagaatttagatagatttaagcagaaccctaaagccgtt
atgattgctagtgatgtcgcagctcgtggattagatattccgttggttgaacatgtaata
cactatcagttaccgcgttctagtgatatatatgttcatcgaagtggtcgtacagcccgt
tcaaggaaagaaggtgtaagcttaatgttgtgtagtcccgaagaactaagtttatatcag
aagttgtgtttgaaattaaataaggttgacggcttagcagactttcctgttgaccgaggc
attttaaattcaatgaaacagagaattaacttggcaagacaaattgatcaagatgaacac
aaaatgcagaagatgaaccacgataatgattggttaaaaaaaaccgcccaagaatttgaa
attgatttagatgatgaagaaatcgttaacgattctaatagaggaaatcagaaacaaatt
aaggaaaaaattcgatcaatgaagctcgaattgaagtcattattatctcaaccattaatt
ccacgaggagtgtctacaaaatatcttacaagtggaattgtacgtgatttagcggataga
ctgttagacgaatcttcgcataattcagcaatattgggtgttaagaatactaaagcaact
gacgatttaagatcaaaaaaaaagacaatacctttatag
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