Rhizophagus irregularis: OCT59_021492
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Entry
OCT59_021492 CDS
T10295
Name
(RefSeq) uncharacterized protein
KO
K08066
nuclear transcription factor Y, gamma
Organism
rie Rhizophagus irregularis
Brite
KEGG Orthology (KO) [BR:
rie00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rie03000
]
OCT59_021492
Transcription factors [BR:
rie03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Heteromeric CCAAT factors
OCT59_021492
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Histone
CBFD_NFYB_HMF
Motif
Other DBs
NCBI-GeneID:
36866094
NCBI-ProteinID:
XP_025182007
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All DBs
Position
30:331196..333378
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AA seq
408 aa
AA seq
DB search
MADPNAQPMHQHHLNQQHRAVQHQPLSIGGPGVPHLLLDPQTLAAAPPPLHPQHQFQPQH
YSVLDSFWQRQVHEIRNEDHDFKVHQLPLARIKKVMKTDEEVKMISAEAPILFAKGCDIF
ITELTMRAWLHAEECKRRTLQRSDIANAIKKVDMFDFLIDIVPREEKVTVKTEKIEYPDH
QSPYYGLGVPQGGHQFNTSSSIPIDHKIIVDSMAQQQQMYMQRMESQHQQMLHDHSEQHQ
HQQHQQPPLLPPLTPVAGQQVSSYRPQNHPQFSHVSANVSAGPVRQVTTDQPYQHHPYYH
HSGFQQHSQELHHPQNQTPSQHHRQSEHNPVQVKYEFERSEWYPHQTNTQLNGHTQSGYG
QHHVSSSSSHGYGQPLDQSSHEYNHENTGMHLTRHEEGYVRDGGVQRD
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atggcggatcctaacgcgcaacctatgcaccagcaccacttaaaccagcaacatagagca
gtacaacaccaaccacttagtataggtgggccaggtgtcccacatcttttattagatccg
caaactcttgctgctgctcctccacccttgcaccctcaacatcaatttcaacctcaacat
tatagtgttcttgatagcttttggcaacgacaagtgcatgaaatcagaaatgaagatcat
gattttaaggttcatcaacttcccttagctaggataaagaaggttatgaaaactgatgag
gaggttaagatgatcagtgctgaggcacccattctttttgcaaaaggttgcgatatattt
ataacagaattaactatgcgagcatggcttcatgctgaagaatgcaaacggaggacttta
caaagatcggatattgcaaacgcgataaaaaaagtcgatatgtttgactttttaatagat
atcgtacctagagaagaaaaggtcacagtcaaaacagagaagattgaatatccagatcat
caaagtccatattatggattgggagtgcctcaaggtggacatcaattcaatacttcgtct
agcattcctattgaccataaaataatagttgattctatggcacaacaacagcaaatgtat
atgcaaagaatggaatcgcagcatcaacaaatgctgcacgatcattcggagcaacatcaa
catcaacaacatcaacaaccacctttattaccgccacttactcccgttgcaggtcaacag
gtatcatcttatagacctcaaaatcatccgcagttctctcatgtctcagccaatgtatct
gcaggtcctgttagacaggtcacaacagatcaaccttatcaacatcatccctattatcat
cattcgggatttcaacagcattcacaagaacttcatcatccccaaaatcaaacaccttct
cagcatcatcgtcaatccgaacataatcctgtacaagtgaaatatgaattcgaaagatct
gagtggtatcctcatcaaacaaatacgcaattaaatggacatacacaaagcggatatgga
caacatcatgttagtagtagtagtagtcatgggtatggacaaccgttagatcaatcatct
catgaatataatcatgaaaacaccggtatgcatttaacgcgtcacgaagaaggttatgta
cgagacggtggtgtacaaagagattaa
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