Rhizophagus irregularis: OCT59_021529
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Entry
OCT59_021529 CDS
T10295
Name
(RefSeq) uncharacterized protein
KO
K12178
COP9 signalosome complex subunit 4
Organism
rie Rhizophagus irregularis
Brite
KEGG Orthology (KO) [BR:
rie00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rie04121
]
OCT59_021529
Ubiquitin system [BR:
rie04121
]
Deubiquitinating enzyme (DUB)
UBL-specific proteases (ULPs)
COP9 signalosome (CSN) complex
OCT59_021529
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PSMD12-CSN4_N
PCI
RPN7
TPR_7
CSN4_RPN5_eIF3a
Motif
Other DBs
NCBI-GeneID:
36866120
NCBI-ProteinID:
XP_025182044
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All DBs
Position
30:complement(501086..502717)
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AA seq
411 aa
AA seq
DB search
MSNINEKLANIATIPSQKDKTAEYRSLLENILPSNDALLADSLEAFVEHIVQEQVGLVIS
RQVLSDFVQGVDKISNPEIKKRVLHFALNKVQPRVVSFEEQISALREKLAEIYENEEDWV
EAAKVLQGIPLDSGHRTIPEEYKLKIYIKIVQLLLEEDEAVSAETYLSRAALLIPSCKDQ
VINLTFKLSQAKIFDFKRKFLEASSKYHELSYVSELAPEDRTNCLNAAITCAVLAGAGPQ
RSRMLATLYKDERVQRLPHFPILEKMYLDRVLRPNEVKGFAETLKDHQKARLADGTTVLD
RAVIEHNLLSASMIYNNITFEELGSLLAISPDQAEQIASSMIEQGRMQGTIDQIERLIFF
ESSYGGGHGKSVGGVLGAKWDLSIQNVCHHVEEVVIAIGAKYPDLMQKSTF
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgtctaatattaatgaaaaacttgcaaacattgcaacaatcccttctcaaaaggataaa
actgcagaatatcgttctttacttgaaaatattttaccttcaaatgacgctttactcgca
gatagtttagaagctttcgtcgaacatattgtacaagaacaagttggcttggtaatttct
cgtcaagtattaagtgattttgtacaaggtgtcgataaaattagtaatccggaaattaag
aaacgtgttcttcactttgctttaaataaagttcaacctagagttgttagttttgaagaa
cagatttcagcacttcgcgagaaattggcagaaatctatgaaaatgaggaagactgggtt
gaagcagcaaaagtattacaaggaattccactagattctggacatcgaacgatacctgaa
gaatataaattaaaaatttatatcaagattgtccaacttcttttggaagaagatgaagca
gtatcagctgaaacatatcttagccgtgctgctttattaattcctagttgtaaagatcaa
gtgattaatcttacatttaaactttcacaagccaagatatttgatttcaaaagaaaattc
ttggaagccagttcaaaatatcatgaattaagttatgtttcggagttggcaccggaggat
cgcacaaattgtctgaatgcagccataacatgtgcggtgttggcaggagcagggccacaa
cgttcacgcatgttggcaacactttataaggatgaacgtgttcaacgcttaccacatttt
ccaattcttgagaaaatgtaccttgatcgagtattaagaccaaatgaggttaaaggattt
gcagaaacacttaaagatcatcaaaaagcaagattagcagatggtacaacagtgcttgat
agggctgtcattgaacataaccttttatcggcttcaatgatttataataatattacattt
gaagaactcggctctttacttgcaatttctcccgatcaagcagaacaaattgcaagctca
atgattgaacagggtcgtatgcaaggtacaattgaccaaatcgaaaggttaatattcttt
gaaagtagttacggaggtggccatggtaaatctgttggaggtgtgctgggagctaaatgg
gatttatctatacagaatgtttgtcatcacgtagaagaagttgtaattgccataggagca
aaatatcctgatcttatgcaaaaatcaactttttag
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