Rhizophagus irregularis: OCT59_021547
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Entry
OCT59_021547 CDS
T10295
Name
(RefSeq) uncharacterized protein
KO
K14327
regulator of nonsense transcripts 2
Organism
rie Rhizophagus irregularis
Pathway
rie03013
Nucleocytoplasmic transport
rie03015
mRNA surveillance pathway
Brite
Messenger RNA biogenesis [BR:
rie03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
OCT59_021547
mRNA cycle factors
P-body specific factors
OCT59_021547
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
36873561
NCBI-ProteinID:
XP_066005717
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Position
30:complement(603040..608949)
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AA seq
1209 aa
AA seq
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METEAEAVAKNERRQELRNVNLLAWRQGKPDSSAFKNLDSNIKKNNTFIKKCKSQLSAEH
QQQLLKDIKTLTLEKYISEVVVAVVEGLQKCKSAADVWATVEVISALHQRFPDTFTPFLT
HMLARSLAPQSKQQLAALSHEQREKEESARIAKQRILLRIAGELWLIGVLRNVEDGIAAP
NSGSAAVGAGSVNGVKENVAGFVSGPIKEKETKETKTSGEGFMYTVLKDLLSHDYKHVNL
PLAVSFIKYFGTEMLGTVGRKSHRDETSIASNENGEDILPVVNGHNSSVNGEKDIINASE
NQIVNESQRALFKSLLVSYFNGVEKHLTEDHQKIKALDRSNHEYYITRGEIPEETKQNYE
KVVKAFDKFLQNVQVLADSLDLEMPDLPEDEGTTKISGTIIRDGSFTNEKEDIVTSSIWE
DEDARSFYENLIDLKTLVPGVLLEVKSSSKKDDADIEKDESINILEKEDKEDEEKVENNQ
SDDEKRRNGEDDKGDMKIANEDQEVDGKNLEEEAKEKDQDVQASPSTKTDNELTNKSGTL
AQLDSLLSRLPNMINRDLIDQAAVDFCYLNSKASRNKLIKTLTTGVPRTRLDLLPYYSRL
IATLNPHYPDITEAVLHYLESEFKSMQKRKTNDFLEIKIKNIRYISELTKFRITPQHIIF
HCLKVLLDDFSNQNIDVACNLLETCGRFLFKSPETSTRMSNMLEIMMRKKSVQHLDSRQL
LMVENAYYQCNPPDRTAIAKKERSVMEQYIRKLVYSDLNKKTVEKILKLLRKLNWEDKEV
YRVLEKCFSKVWKIKYSNIHLMAILASGLHRYHSDFGVALVDRVIEDIRIGLEQNIFKHN
QRRIATVKYLGELYNYRMVESAVIFETLYSITTLGHEFGRPAPNRINHLDAPVDFFRIRL
CCTLLDTCGMCFDRGSSMKRLDDFLVFFQMYILTKQRLPMDIEFMVADLFEMLRPGITIY
KTYEEAAGEVDKMLMENHMALQDAQGTSKSQEDGVEESEMSSSDDDDDDEGQDEEIDRER
DDAEGAEEEPETDEVNDDEGDDELIVHTNRQEKVPTEEDEEFEREFSRMMTESMESRKYE
RKPAMLDVAIPMYLKGSDKVSDFLDGNVAFTLLTKKGRKTMEVPSDSALAVNTRSKQEAE
REEQQQLKKLVLNYEEREEQNQRIALEQSLISSGMKVTYQSNRRGQKGRKMLHHHGGGGG
MAYSNDRRR
NT seq
3630 nt
NT seq
+upstream
nt +downstream
nt
atggaaaccgaggcagaagcagtagcaaaaaacgaaagacgtcaagaattaagaaatgta
aatctattagcctggagacaagggaaacctgattcttctgcattcaaaaatctcgactca
aatataaaaaagaacaacacgttcattaaaaagtgtaaatctcaattatcagcagaacac
caacaacaactattaaaagatattaaaacattgacccttgaaaaatatatttccgaagtg
gttgttgctgtggttgaaggattacaaaaatgtaagtcagcagcagatgtttgggctact
gttgaagtgatttccgctttgcatcagcgatttccggatacatttaccccatttttgacg
catatgttagctcgttctcttgctcctcaaagtaaacaacagcttgcagctcttagtcat
gaacaacgtgaaaaagaggagtctgcacgaattgcgaaacaacggattttgttaagaatc
gcaggtgaattatggttgataggcgtccttagaaatgttgaggacggaattgcagcgcca
aatagtggaagcgcggcagtaggagccggaagcgtgaatggtgtcaaagaaaatgttgcc
gggttcgtcagcggtccgatcaaagagaaagagaccaaagagacaaagacttccggggaa
ggtttcatgtatactgtgttgaaagatttgctttctcatgactacaaacatgtcaactta
ccgttggcagtatccttcatcaaatactttggcacggaaatgctcggtacggtcggtcgt
aaaagtcatcgcgatgaaacatctatcgcatccaatgaaaacggtgaagatatactccca
gtcgtgaacggtcacaactcatcggttaatggtgaaaaagatatcataaacgccagcgaa
aaccaaattgtgaatgaatctcaacgagctcttttcaaatctttattggtcagttatttc
aatggcgtggaaaaacatttaactgaagaccatcagaaaatcaaggcattagatcgtagc
aaccacgaatattatattactcgaggagaaattccagaagaaacaaagcagaattacgaa
aaagtcgtgaaagcttttgataagtttttgcaaaatgttcaagttttggcggattctttg
gatcttgagatgcccgatttgcctgaagatgagggtacaacaaaaataagtggtacaatt
atacgtgatggatcttttaccaacgagaaagaggatattgttaccagcagtatctgggaa
gatgaagatgcacgtagtttttacgagaatctcatagaccttaaaacattggtacctggc
gtccttcttgaggtcaagtccagtagcaagaaagatgatgcggatattgagaaagatgaa
tccattaatatactcgaaaaggaagacaaggaagacgaggaaaaagttgaaaataatcag
tctgatgacgaaaaaagaagaaatggcgaagatgataagggtgatatgaaaattgcgaat
gaggatcaagaggttgatgggaaaaatttagaggaagaggctaaagaaaaagatcaagat
gttcaggcttcaccatctacaaaaacggataacgaattgactaacaaaagtggcacattg
gcccaacttgattctttgttgtcacgtcttcctaatatgattaaccgtgaccttattgat
caagcagcagttgatttttgttatttaaattccaaggcatctagaaataaattgataaaa
actttaacaacaggagtacctcgaacaagacttgaccttcttccttattactcgcgctta
attgcaacgcttaatccgcattatccagacatcactgaagcagttttgcattatctggaa
agtgaattcaaatccatgcaaaaaaggaaaacgaatgattttctcgaaataaaaattaag
aatattcgatatatctctgaattaacaaaattcagaattacaccacaacatataattttc
cattgccttaaagtattactcgatgatttttcgaatcaaaacattgatgttgcttgcaat
ttgctggaaacatgtggaaggtttctatttaaaagtcctgagacaagtaccagaatgagt
aatatgttggaaataatgatgagaaagaaaagcgtccaacatcttgatagtcgacagctc
ttgatggttgaaaacgcatattaccagtgtaatccacctgaccgaaccgcgatcgctaag
aaggagcgatcggttatggaacaatacattcgtaagctagtttattctgaccttaacaag
aaaactgttgagaaaattctcaaattgcttcgtaaattaaactgggaagataaagaagtg
tacagggttttagaaaaatgtttctccaaggtgtggaaaattaaatatagtaacatacat
ttaatggctattcttgcttcaggcttgcatcgttatcattctgattttggtgtagcctta
gttgatagagttattgaggatatcaggatcggtttagagcaaaacatttttaagcacaat
caacgccgtattgcaactgttaaatatcttggtgaactttataattaccgaatggtagaa
tcggccgttatttttgaaactctttattccattactactttgggtcacgagtttggtcgt
cccgccccaaaccgtattaatcacttagacgctccagttgatttctttcgcatccgtttg
tgttgtaccttgctcgacacatgcggtatgtgcttcgatcgaggtagttctatgaagcgt
ttggatgattttctagttttctttcagatgtatatccttacaaaacaaagacttcctatg
gacatcgaatttatggttgctgatttgtttgagatgctaagaccaggaataaccatatat
aaaacatacgaagaagctgcaggagaagtagacaagatgcttatggaaaatcatatggct
ttacaagatgcccaggggacatcaaaaagtcaggaggatggcgtggaagaaagcgaaatg
tcatcttcagatgatgacgacgatgatgaaggtcaagatgaagaaatagatagagaacgt
gatgacgcagaaggagctgaagaagaacccgaaactgatgaagtcaacgacgacgaagga
gatgatgaacttattgttcatacaaatagacaggagaaagttcctactgaagaagacgaa
gaatttgaaagagagttcagcagaatgatgactgagagtatggagtctcgtaaatatgaa
cgtaaacccgccatgttagatgtggcaattcctatgtatctaaagggttctgataaagtt
tcagactttttagatggtaatgttgcgtttactttattaacaaagaaaggaaggaaaacg
atggaagttccatcagacagtgctttagcagttaatacgcgctctaaacaggaagctgaa
cgtgaagagcaacaacagctcaagaagttggtattaaattatgaggaaagagaagagcaa
aatcaacgaattgctcttgaacagtctttaattagtagtggaatgaaagtaacatatcaa
agtaatcgtcgtggtcagaaaggtcgtaaaatgcttcaccatcacggtggaggtggaggt
atggcctactccaacgatagacgacggtga
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