Rhizophagus irregularis: OCT59_021586
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Entry
OCT59_021586 CDS
T10295
Name
(RefSeq) uncharacterized protein
KO
K11883
RNA-binding protein NOB1
Organism
rie Rhizophagus irregularis
Pathway
rie03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
rie00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
OCT59_021586
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rie03009
]
OCT59_021586
03051 Proteasome [BR:
rie03051
]
OCT59_021586
Ribosome biogenesis [BR:
rie03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
OCT59_021586
Proteasome [BR:
rie03051
]
Eukaryotic proteasome
Assembling factors
Other assembling factors
OCT59_021586
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Zn_ribbon_NOB1
PIN_6
Ogr_Delta
E6
DZR
Ribosomal_aS21
Zn_ribbon_15
HypA
DZR_2
Zn_Ribbon_1
Motif
Other DBs
NCBI-GeneID:
36871075
NCBI-ProteinID:
XP_025170567
LinkDB
All DBs
Position
30:<775932..777905
Genome browser
AA seq
487 aa
AA seq
DB search
MVSNTNNSLESMSTNTPVSNSSIVNDVGQKIESLVIDSGPLIKGINVRAFAEKIYTIPEV
ISEIRDKHSRDFLNQISFNLQIKVPSDEALKEVVNFSKKTGDFASLSAVDLRVLALTYML
EVEANGTKRLRKEPIKSFTKFGGNNNNSNKNFKKKPLNKPESMEIINKREQQQQIDETNL
VSNLESLKLTDITAEFSSSEGMDHQRDAVSNLYQVENSEQLNNIDFNNDCSLSKDEPIVE
ISAHNAERYNTSIHVSDQNSINQKRNEISDVHQDEEYGDDDIGWITPDNINDYQAKEHEF
LINLKKDNLENVKIACMTTDYSMQNVLLQMRLNLISVEGKRIRKVKNWVLRCHACFKITT
NMEKKFCPNCGNAALIRTSTSTDVNGNVTYYLKKNFQYNLRGTKYSIPEPKGGRNASNII
LREDQKEYQKALKNQRKQKEIDIFDPDYIPKLLIGSSNSKSISPVIGYGRRNPNEARRGK
TKGRKKR
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atggtatccaacacaaacaactctttagaatctatgtcaacgaatactcctgtaagtaat
agcagtatcgttaatgatgtagggcaaaagattgaaagtttagtgatagattctggtcct
ctaattaaaggcataaatgttcgagcatttgcagaaaaaatttacactatacctgaagtt
atttctgaaattcgagataaacattctcgtgattttttaaatcaaatttcatttaatctt
cagattaaagtaccttcagatgaggcattaaaagaagttgtaaatttctcaaaaaaaact
ggcgattttgccagtttatctgctgtagatttgagagttttggcattgacctatatgttg
gaagttgaagctaatggtactaaacggttaagaaaagagcccatcaaatcttttacgaaa
tttggtgggaataacaataattccaacaaaaattttaaaaagaaacctttaaataaacct
gaatcgatggaaattattaataaacgggaacagcagcaacaaattgatgaaacaaattta
gtgtcaaatttggaaagtttgaaactcacagatattacagctgaattttcaagttcagaa
ggaatggatcatcaaagagatgctgttagcaacctttaccaagttgaaaattctgaacaa
ttgaataacattgactttaataatgattgttccttatcaaaagatgagccaattgtagaa
atttcggcgcataatgctgaaaggtataatacttcaatacatgtctcagatcaaaattct
attaatcaaaaaaggaatgagatatcggatgtccatcaagacgaagaatatggtgatgat
gatattggatggataactccagataatattaatgattatcaagcaaaagaacatgaattt
ctcatcaatttgaagaaagataatcttgaaaatgttaaaattgcttgtatgacgacggat
tattcgatgcaaaatgttttgttacaaatgcgactaaatttgatatcagttgaaggaaag
agaattagaaaagtgaagaattgggttcttagatgtcatgcttgtttcaaaataactaca
aatatggaaaaaaaattttgtcctaactgtggaaatgcagctttaattcgtacatcaaca
agtacggacgtgaatggtaatgtgacatattacttgaaaaagaattttcaatacaattta
cgtggaactaagtattcaataccggaaccgaaaggtggtcgtaatgctagtaatattatc
cttcgagaagatcaaaaggaataccaaaaagcattaaagaaccaaagaaaacaaaaagaa
attgatatatttgatccagattatattccaaaacttttaattggatcaagtaattcaaaa
tctatttcccctgtaattggttatggtcgtagaaatccaaatgaagctagacgaggaaaa
accaaagggagaaaaaagcgataa
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