KEGG   Rhizophagus irregularis: OCT59_021735
Entry
OCT59_021735      CDS       T10295                                 
Name
(RefSeq) uncharacterized protein
  KO
K10755  replication factor C subunit 2/4
Organism
rie  Rhizophagus irregularis
Pathway
rie03030  DNA replication
rie03410  Base excision repair
rie03420  Nucleotide excision repair
rie03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:rie00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    OCT59_021735
   03410 Base excision repair
    OCT59_021735
   03420 Nucleotide excision repair
    OCT59_021735
   03430 Mismatch repair
    OCT59_021735
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:rie03032]
    OCT59_021735
   03036 Chromosome and associated proteins [BR:rie03036]
    OCT59_021735
   03400 DNA repair and recombination proteins [BR:rie03400]
    OCT59_021735
DNA replication proteins [BR:rie03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    OCT59_021735
  DNA Replication Termination Factors
   ELG1-RFC complex
    OCT59_021735
Chromosome and associated proteins [BR:rie03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    OCT59_021735
DNA repair and recombination proteins [BR:rie03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     OCT59_021735
  Check point factors
   HRAD17(Rad24)-RFC complex
    OCT59_021735
SSDB
Motif
Pfam: Rep_fac_C AAA AAA_lid_RFC1 AAA_14 RCF1-5-like_lid DNA_pol3_delta2 AAA_11 AAA_19 Rad17 AAA_22 AAA_assoc_2 DNAX_ATPase_lid AAA_16 RuvB_N Mg_chelatase nSTAND_NTPase5 DUF815 Viral_helicase1 AAA_28 AAA_7 nSTAND3 ATPase_2 AAA_3 bpMoxR AAA_30 AAA_5 AAA_RNF213_4 PylC-like_N Ku_PK_bind
Other DBs
NCBI-GeneID: 36873581
NCBI-ProteinID: XP_025178263
LinkDB
Position
30:complement(1398230..1399578)
AA seq 339 aa
MSTISRANVAITDLPWLQKYRPATFDDIVGNEHSINILKNVAKKGNIPNFLLSGPPGTGK
TSSIVCLANELYGKELAKRAILELNASDERSVNVIRDKVKAFAQTKVTLPPGLQKFVILD
EVDSMVDPAQKALRAIMEQYSDTTRFALACNNEDKIDEAIMSRITKLSFTNLSQEEVALR
LLYIIKQENIKYTPEGLQAIIFTADGDMRQAINNLQSTYSGFGMIDEENVYKVCDVPDPK
YIMEMLKRCIRYEVKNVFNAVVKLYGDGYSALDIVQTMMKLMKSASENEIEEDYYNDFLM
EIAKTELVIKSGTDSELQVIGLVSSLCDIAKSISKRKND
NT seq 1020 nt   +upstreamnt  +downstreamnt
atgtctactatttcaagagctaatgtagcaataacagaccttccgtggctccaaaaatat
cgtccagctacatttgatgacatagttggaaatgaacattcgataaatatattgaagaat
gttgctaaaaaaggaaatataccaaattttttattatcgggaccacctggtactggtaaa
actagtagtatcgtttgccttgctaacgaactatacggaaaagagttagctaaaagagct
attctggagcttaatgcttctgatgaaagatctgttaatgttattagagacaaggttaag
gcatttgctcaaacaaaggttacacttcctcctggattacaaaaatttgtaattttggat
gaagttgatagtatggttgatccagcgcaaaaagcacttcgagcaattatggagcaatat
tctgatacaacaagatttgctttagcatgtaataatgaagataaaattgatgaagcaatt
atgagcagaataacaaaattatcttttaccaatttatcacaagaagaagttgcattacga
cttttgtatataataaagcaagaaaatattaaatacactcctgaaggtttacaagcaatc
atatttacagctgatggagatatgagacaagctattaataaccttcaatctacatactca
ggatttggtatgattgatgaggaaaatgtttacaaagtgtgtgatgtaccagatcctaaa
tatataatggaaatgcttaaacgttgtatacgttatgaagtaaagaacgtttttaatgct
gttgttaaattatatggtgatggttattctgctttggatattgttcagacaatgatgaaa
cttatgaaatctgcttccgaaaatgaaattgaagaagattattataatgattttctaatg
gaaattgccaaaaccgagttagtcattaaatctggaaccgacagtgaacttcaggttatt
ggtttagtaagttctctttgtgatattgctaaatcaatttcaaaaagaaagaatgattag

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