Rhizophagus irregularis: OCT59_021873
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Entry
OCT59_021873 CDS
T10295
Name
(RefSeq) Tubulin beta-4B chain
KO
K07375
tubulin beta
Organism
rie Rhizophagus irregularis
Pathway
rie04145
Phagosome
rie04517
IgSF CAM signaling
rie04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
rie00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
OCT59_021873
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
OCT59_021873
09142 Cell motility
04814 Motor proteins
OCT59_021873
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rie03036
]
OCT59_021873
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
rie04812
]
OCT59_021873
04147 Exosome [BR:
rie04147
]
OCT59_021873
Chromosome and associated proteins [BR:
rie03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
OCT59_021873
Cytoskeleton proteins [BR:
rie04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
OCT59_021873
Exosome [BR:
rie04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
OCT59_021873
Exosomal proteins of colorectal cancer cells
OCT59_021873
Exosomal proteins of bladder cancer cells
OCT59_021873
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Misat_Tub_SegII
Tubulin_3
Tubulin_2
Motif
Other DBs
NCBI-GeneID:
36862222
NCBI-ProteinID:
XP_025167076
LinkDB
All DBs
Position
30:complement(2187681..2189972)
Genome browser
AA seq
448 aa
AA seq
DB search
MMREIVHLQTGQCGNQIGAKFWEVISDEHGIDYSGTYTGDSDLQLERISVYYNEATGGKY
VPRAVLVDLEPGTMDSVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDV
VRKEAESCDCLQGFQITHSLGGGTGAGMGTLLISKIREEYPDRMMCTFSVVPSPKVSDTV
VEPYNATLSVHQLVENSDETFCIDNEALYDICFRTLKLSTPTYGDLNHLVSAVMSGITTC
LRFPGQLNADLRKLAVNMVPFPRLHFFMVGFAPLTSRGSQGYRSLSVPELTQQMFDAKNM
MAASDPRHGRYLTVAAMFRGRCSMKEVDDQMLSVQTKNSSYFVEWIPNNVKTAVCDIPPK
GLKMSVTFIGNSTSIQELFKRISDQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV
SEYQQYQEATIEEEDGEYEEDLDQDADV
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgatgagagaaatcgtccacttacaaaccggccagtgcggcaaccaaataggtgctaaa
ttttgggaagttatatcagatgagcatggtattgactattctggaacctatactggcgac
tctgaccttcagttagaaagaatctccgtatactataatgaggctactggtggtaaatat
gtaccacgtgctgttctcgttgaccttgagcctggtaccatggattctgttcgtgctggt
ccttttggacaactttttcgcccagataattttgtttttggccaaagtggcgccggtaac
aattgggcaaaaggccattacaccgaaggcgctgaacttgtagattctgtattagacgtt
gtccgtaaagaagcagaatcttgtgactgtttacaaggtttccaaattactcattctctt
ggtggaggtactggcgctggtatgggcaccttgctcatctcaaaaattcgcgaagaatat
ccagaccgtatgatgtgcacattctcagtagttccttcaccaaaggtatctgatactgtc
gttgaaccatacaatgctacattgtcagtacatcaattggtcgaaaattctgatgaaacc
ttttgtatcgacaacgaggccttgtatgacatttgcttccgtacattgaaattgagcacc
ccaacttatggtgatctcaatcatttagtatctgctgttatgagcggcattactacatgt
ttacgattccctggtcaattgaatgctgatttgagaaaactagccgtaaatatggttcct
ttcccacgtctccatttcttcatggtcggatttgctccattgacttcccgtgggtctcaa
ggctatcgttccttaagtgttccagaattaacccagcaaatgtttgatgccaagaacatg
atggctgcttcagatcctcgtcatggccgttatttgactgttgctgctatgtttagaggt
cggtgttcaatgaaggaagtagatgatcaaatgttatctgtccaaacaaagaacagttcg
tattttgttgaatggatacctaataatgttaagactgccgtttgtgacattccaccaaag
ggtcttaagatgtcagttactttcatcggcaattcaacatcgattcaagaactcttcaaa
cgcatcagtgatcagttcactgctatgtttaggcgtaaggctttcttgcattggtacaca
ggagagggtatggacgaaatggaatttactgaagccgaatctaatatgaatgatctggta
tctgaataccaacaatatcaagaagctacaattgaagaagaggatggggaatatgaagaa
gatttagatcaagacgctgatgtctaa
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