KEGG   Rhizophagus irregularis: OCT59_021876
Entry
OCT59_021876      CDS       T10295                                 
Name
(RefSeq) uncharacterized protein
  KO
K12842  U2-associated protein SR140
Organism
rie  Rhizophagus irregularis
Pathway
rie03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:rie00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    OCT59_021876
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:rie03041]
    OCT59_021876
Spliceosome [BR:rie03041]
 Complex A
  U2 snRNP components
   U2 related factors
    OCT59_021876
 Complex B
    OCT59_021876
SSDB
Motif
Pfam: Surp RRM_1 CID CTK3 RRM_7 LegC3_N Nab6_mRNP_bdg
Other DBs
NCBI-GeneID: 36872428
NCBI-ProteinID: XP_025167074
LinkDB
Position
30:complement(2202683..2206419)
AA seq 733 aa
MPDEKKLPWGINATKPGSAKTLTKTKLQAFSIGTHKKTPFQKHKEELELKKKQESEEAAK
VYAEFVASFEKEEGAGKTFVKGETIVPKLLFDHEAINAKKEPTITTSAPKLYKPQAFVSV
SKPIQPESKPEDSAEKIEKNEDEEKKDDKSKRKRNLDAFLEEIKREQEEREDRLRQKHAK
LAGAGVSSAFEDRPGSHDTGDPNTTNLYVGNISPEVNEEMLCKEFAKYGPIASVKIMWPR
TQEEKDRNRNCGFVSFMDRECAAQALKNMDGKELLGYVMRVGWGKAVPIPPKPIYVLNEG
VRPPPSGLPFNAQMVHTKAYTNVPPPGTSTVSTVAPKGPRLEVHVSRPENVQIVKIIHRM
VERVVKFGPPFEAIIMDREWNNPKFSFLFQNDSLEHVYYRWRLYSILQGDPKNKWRTEPF
HMFDEGPIWVPPEIPFDEDAADELLDSDEEDERERERIPKGTLGPKAKHRLEVMLRKLTF
ERGVIAKTMAFAIDHSDAADEIVEIICKTLMIKETPIPTKVARLYLVSDVLHNSSVSVPN
AWKFRTGFESKLPEVFEHLNEVYRSITARLKAETFRRQVTTILTVWENWIVFPQPYIESL
TNTFMKNTKEGDSLTYSSIPQSSTSSTSSIDGNANNLLDGVPMNMDIDSEASSKLNIGGI
LGVKTKWDNDEEEDNNHSDNIKKDGSPTSSINGSRGISEIEPTKSSETKDYGSEKMKLGN
EEVDDEVEDDIFA
NT seq 2202 nt   +upstreamnt  +downstreamnt
atgcccgatgaaaagaagctcccttggggaatcaatgcgacaaaaccaggttccgctaag
actttaacaaaaacaaaattacaagcttttagcattggcactcataaaaaaactccattt
caaaaacataaagaagaactcgaattaaagaaaaagcaagaatccgaagaagccgcaaaa
gtatatgcggaatttgttgcttcttttgaaaaggaagaaggcgcaggaaagacatttgtt
aaaggcgaaacaatagtaccgaaattattatttgatcatgaagcaatcaatgcaaaaaag
gagccaactataaccacatcagcacctaaactttataaaccacaagcttttgtttctgtc
tcaaaacctatacaaccagaatcaaaaccggaagattctgcggaaaaaatcgaaaagaac
gaggatgaagaaaaaaaggacgataaatctaaaagaaaacgtaatttagatgctttcttg
gaagaaattaagcgtgaacaagaggaaagagaagatcgtttaaggcaaaaacatgcaaag
ttggctggcgctggcgtatcatctgcttttgaagatagaccgggctcacatgatactgga
gatccgaatacaacaaatttatatgttggaaatataagtccagaggttaatgaagaaatg
ttatgtaaagagtttgcaaaatatggcccaatagctagtgtgaaaattatgtggccccgt
actcaagaagagaaggatagaaaccgaaactgcggatttgtcagttttatggatagggaa
tgtgcggctcaggctttaaaaaatatggatggcaaagaattgctcggatatgttatgcgt
gttggttggggcaaagcagtccctattccaccgaaacctatttacgtgctaaacgaagga
gtccgtcctccgccaagcggattaccttttaacgctcaaatggttcacacaaaagcatat
acaaatgtaccgccgccaggtacatccacagtgagtacagttgcaccaaagggtcctcgc
ctcgaagttcatgtgtctcgtccggaaaatgtccagatcgttaaaataatacatcgtatg
gtagaacgagttgtaaaatttggaccaccatttgaggcaatcatcatggatcgagaatgg
aataatcctaaattttcatttttatttcaaaacgactcacttgaacacgtgtactatcga
tggagattatactctatacttcaaggagaccccaagaataagtggcgcactgaacctttt
cacatgtttgacgaaggacctatttgggtacctcccgagataccgttcgatgaagacgca
gcagatgaattattagattctgatgaagaagacgaacgtgagcgagaacgcatacctaaa
ggaactttggggcctaaagctaaacaccgcttggaagtgatgctccgaaaattgaccttt
gaacgtggtgtcattgctaagacaatggcttttgctattgatcattctgatgccgcagat
gagattgttgaaattatatgcaagactcttatgatcaaagaaactcccatccctactaaa
gttgcacgattatatctagtgtcagatgttttacacaatagtagcgtttctgttccaaat
gcttggaaattccgaactggattcgagagtaaattacctgaagtgtttgaacatttgaat
gaggtatacagatctatcacggctaggctgaaagcagagacatttaggcgtcaagttaca
actattctcaccgtatgggaaaattggatcgtttttccacaaccatatattgaatcatta
acaaatacattcatgaagaatacaaaagaaggtgacagtcttacatattcttcaatacca
caatcatcaacatcatctacatcatcaattgatggcaacgcaaataatcttcttgatgga
gtgccaatgaatatggatattgatagtgaagcatcaagtaaactaaatataggtggtatt
ttaggagtaaaaacaaaatgggacaatgatgaagaggaagataataatcatagcgataat
attaaaaaagacggttcaccaacatcatcaattaacggatcacgggggatttcagaaata
gaaccgacaaaatctagtgaaactaaagattatggatctgagaaaatgaaattagggaat
gaagaagtggatgacgaagtggaagatgatattttcgcttaa

DBGET integrated database retrieval system