Rhizophagus irregularis: OCT59_021883
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Entry
OCT59_021883 CDS
T10295
Name
(RefSeq) uncharacterized protein
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
rie Rhizophagus irregularis
Brite
KEGG Orthology (KO) [BR:
rie00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rie03016
]
OCT59_021883
Enzymes [BR:
rie01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
OCT59_021883
Transfer RNA biogenesis [BR:
rie03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
OCT59_021883
Prokaryotic type
OCT59_021883
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
PseudoU_synth_2
Motif
Other DBs
NCBI-GeneID:
36872423
NCBI-ProteinID:
XP_066005914
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All DBs
Position
30:2216603..2217628
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AA seq
235 aa
AA seq
DB search
MMIPHGLFAINKPRGLSSVTILNKIKKLQTKNKLKLGHGGTLDPLASGVLVIGVNDGCKR
LQEYINCNKTYEAIGILGLATDTYDSEGKIIATGPTKHITKEYISQIISKFTGDIMQVPP
LYSALRMEGRRLYEYAREGLSLPKDLQPRSVRINSLSLLNFMTNASYPTFKIRVECGRGT
YIRSLVHDIGKELGSAAYVVELIRIQQGNFILKENTLEWDECSNLNNIFEALNKN
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
atgatgatcccacacggcctttttgcaataaataaaccaagaggactatcttcggttacc
atattaaataagattaaaaagcttcaaacgaaaaacaaattaaaattaggccacggtgga
actttagaccctttagcaagtggagtactagtaattggtgtaaatgacgggtgtaaaaga
ctgcaagaatatattaattgcaataagacatacgaagcaattggaatacttggactcgct
acggatacctatgattctgaaggtaaaatcatagctactgggccaacaaaacatattact
aaagaatatatttcgcaaataatttctaaatttacgggagatatcatgcaagttccacca
ctgtattctgctctaagaatggaaggtcgacgtctctacgaatatgcgcgcgagggactg
tctcttccaaaagatttacaacctcgatctgttagaatcaattctttatccttgttaaat
tttatgacaaatgcgtcttacccgactttcaaaattcgtgtggaatgtggaaggggaact
tatattaggtcattagttcatgacatagggaaagagcttggaagcgctgcatatgttgtc
gaattgataagaattcagcagggaaattttatattaaaggagaacactctcgaatgggat
gaatgttcgaatttaaataatatctttgaagctttaaataaaaattag
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