Rhizophagus irregularis: OCT59_022071
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Entry
OCT59_022071 CDS
T10295
Name
(RefSeq) uncharacterized protein
KO
K15201
general transcription factor 3C polypeptide 3 (transcription factor C subunit 4)
Organism
rie Rhizophagus irregularis
Brite
KEGG Orthology (KO) [BR:
rie00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rie03021
]
OCT59_022071
Transcription machinery [BR:
rie03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIC
OCT59_022071
TFIIIC, fungi type
OCT59_022071
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_19
TPR_14
TPR_8
TPR_16
TPR_12
TPR_9
TPR_7
TPR_11
TPR_CcmH_CycH
TPR_17
ANAPC3
TPR_Slam
T7SS_EccA1_N
PknG_TPR
Motif
Other DBs
NCBI-GeneID:
36869611
NCBI-ProteinID:
XP_025174126
LinkDB
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Position
30:2988095..2992907
Genome browser
AA seq
1127 aa
AA seq
DB search
MANKNLPRNTPNPTTFLDLLNNTYDDADLVHMLAEATDLTSTAAVSSSFGFNSSSEEASF
DQPESREFQNFDEHLDLVDDEEEFIEDFEGEVYDFEGEYDELQNSDLIEDAFANKLTDAE
ENEQMDKVEEEDDDDDEKYLSDNFGRLLSQAEAIGSDLTKGDSVPHLWQNLEKEWTEFNQ
DLRLTSGIGRIKKGKKGPRPRVIPPNLRALVGEANLHYVNRDYPKAIEILQEVIKIDPNI
HSAWFTLGTIQDEMGCPEKALQLYLVAAHLTPHDGALWKRLGLLSKNHNSIHQAIYCFSK
AIRCDNNDVDAIWDRSILYSEIGEFKKAIDGFKGLLEKIPYDMNVLREVTRIQVQMNEIP
QAIELFLDAYSYYRNRPLPEDPEAEGSFGYSEINIMAELYMLAGDYNNAIDFIKQGVRWL
QGRENETWWDYINDDREYEEEENLDRRDHASILAAARLRGASSTGGSNATLPIELRVKLG
QCRILTDRLEEGKLHFAYLESYDVEQYVDLYYEVAETYTDKGLFEDALSIYEIIVENEST
DKPLAWMRMGMCHRELGNLESVAEYFAAVVKELPDNLDIKMALAETYEDLDEKEKALEIV
NEVLEARKRKLAQAAAESQLESSSSTSNQLNISSLHNLSAGTLQNESSLIQTVSEESKAN
AFARAEEERKQKIAEKEKETKIQFHRLDLLYDRSKLGDCESAKEFLETARNVVIDWKNNR
AFYPQRDRMLPFKGWDRRRSWRKQVYFEEFENSNDSDDAYLDEQATTMAKRLQWRIDGEK
GELEDEIRKKITEFNGITFEKWFDFFIKYIVTATKNNCEQEAFDLLKLACRANVFFHNIH
YTTVLKLLSLAWGLHTRNFLVVCENARWLCNHEPFNSNLYNLYGAGMSSGSNALSCFAAA
NSQKYFLRQVKLMDTGFYQTPIIKNNSSNSDKSESEIKQKPVMKKAKVPEKPNAALLSLY
GHILACARSYVGAIGYYSRAYSVKPKDPLISLSMGLAYMHRSMQRISDNRHLQIMQAFTF
LYNYYELKERNQEAEYNLGRAFHELGLYHLAVPHYERCLKLPSLQQVFREQHEKGKSSEN
LSEECPVEDDDDPTSLRRDAAYNLSMIYVGNGSPGLAAVLLRQYCTI
NT seq
3384 nt
NT seq
+upstream
nt +downstream
nt
atggcaaataaaaatttaccgagaaatactccaaacccaacgacatttctcgacctactt
aataatacgtatgatgacgcagatttagttcatatgcttgcagaagctacagatcttaca
tctacggctgctgtaagttcttcttttgggtttaattctagctctgaggaagcaagtttt
gatcaaccagaatccagagaatttcagaattttgatgagcatttggatcttgttgacgat
gaagaggagtttatagaagattttgaaggagaagtatatgattttgaaggagaatatgat
gaattgcaaaattctgatctaattgaagatgcgtttgcaaataaattgaccgacgcagaa
gaaaatgaacaaatggacaaagtggaagaagaagatgatgatgacgatgagaaatatttg
tcggataattttggtcgtttattatcacaagctgaagctattggtagtgatttaaccaaa
ggagattctgttcctcacctttggcaaaatctggaaaaagagtggaccgaatttaatcaa
gatttaagacttactagtggaattggaagaataaaaaagggaaagaaaggtccaagacct
cgtgttattccgccaaatcttcgtgcattagttggggaagctaatttacattacgtaaat
agagattatccaaaagcaattgaaattcttcaagaggttattaaaatcgatccaaatatt
cattctgcttggtttacccttggaactattcaagatgagatgggatgtccagaaaaagct
ttgcaattgtatttagttgcagctcatttaacacctcacgatggtgcattatggaagaga
ttaggccttttaagcaaaaatcataattcaatccatcaggctatttattgtttctctaaa
gcaatcagatgtgataataatgatgtggatgctatttgggatcgatcgattctatattca
gaaattggagaattcaaaaaagcgatagacggttttaaaggtctattagaaaagataccc
tatgatatgaatgtattacgagaagtaactcgtattcaagtacaaatgaatgaaattcct
caagccattgaactttttcttgatgcttattcctattatagaaataggcctttaccagaa
gatcctgaggccgaaggaagtttcggatattctgagataaatataatggctgaactttac
atgttagctggtgattataacaatgctattgattttattaagcagggtgtaagatggttg
caaggaagagaaaatgagacatggtgggattatataaatgatgatcgtgagtatgaagag
gaggagaatttagatagaagagatcatgcctcaattttagcagctgctcgacttcgtggt
gctagtagcacgggaggttcaaatgctacattacctattgaattaagagttaaattggga
caatgcagaattttaacagatcgacttgaagaaggcaaactacattttgcttatctcgag
tcatacgatgttgagcagtatgtagatttgtactatgaagtagctgaaacttatacagac
aaggggttgtttgaagatgctttgtcaatatatgaaataattgtcgagaatgaatctaca
gataaaccccttgcatggatgcgaatgggaatgtgtcaccgagaattaggaaatcttgaa
agcgtggccgaatatttcgccgccgttgtgaaagagttaccagataatttggatattaaa
atggcacttgctgaaacctatgaagatttggatgaaaaggaaaaagcgcttgagatagtc
aatgaagttcttgaagcgcgtaaaaggaagcttgctcaagcggcagcagaatctcaatta
gaatcatcatcatcgacatcaaatcaactcaatattagttcattgcataatttatcagca
gggaccttacaaaatgaatcgtccttaattcaaactgtgtctgaagaatccaaagctaac
gcttttgcaagagcagaagaagagcgtaaacaaaaaatagcagaaaaagaaaaggaaact
aaaattcaatttcacagattagatcttttatatgatcgttctaagcttggagattgtgaa
tcagctaaagaatttttggaaactgctagaaatgttgttattgattggaaaaataacagg
gctttttatcctcagagagacaggatgctcccatttaaaggatgggaccgtcgaagatcc
tggagaaaacaagtttacttcgaagaatttgaaaattctaatgatagtgatgatgcttat
ctagatgaacaagcaactacaatggcaaaaaggttgcaatggcgtattgatggtgaaaaa
ggcgaattagaagatgaaatacgcaaaaaaattaccgaatttaacggtattacttttgaa
aaatggtttgatttttttatcaagtatattgtcactgcaacaaaaaataattgtgaacaa
gaggcttttgatcttcttaagttagcttgtagagcaaatgtattttttcacaatattcat
tatacaactgttctcaagttgttatcattggcttggggacttcatacacgcaatttttta
gttgtatgtgagaatgcaagatggctatgtaatcatgagccatttaatagtaatttatat
aatttatatggagcaggaatgtctagtggttcaaatgcgttatcatgctttgcagccgca
aattcccaaaaatattttcttcgtcaagtcaagttgatggatactgggttttatcaaact
ccaataataaaaaataactcgagtaattcagataaatccgaaagtgagattaaacaaaaa
cctgttatgaaaaaagccaaagttcccgagaaaccaaatgcagcattattatcactttat
ggacatattttggcatgtgccagaagttatgtcggtgcaattggatactattctcgtgcg
tattcggttaaaccaaaagatccattaattagtttgtcgatgggacttgcatatatgcat
cggtctatgcaaagaataagtgataatcgacatttacaaattatgcaggcatttacattt
ttgtataattattacgaactgaaagaaagaaaccaagaggctgaatataatctcggaaga
gcttttcatgaacttggtttatatcatttagctgtgcctcattatgaaagatgcttaaag
ttaccttcccttcagcaagttttcagagagcaacatgagaagggtaaatcatccgaaaat
ctttccgaagaatgtcccgtcgaggatgatgatgaccctacaagccttagaagggatgcg
gcatataacttatcaatgatttatgtgggaaatggatctcctggcttagcggcagtatta
ttaagacaatattgtactatatga
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